Gardnerella vaginalis 409-05: HMPREF0424_1292
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Entry
HMPREF0424_1292 CDS
T01146
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gva03000
]
HMPREF0424_1292
Transcription factors [BR:
gva03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HMPREF0424_1292
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GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
HTH_Tnp_ISL3
DUF4148
Motif
Other DBs
NCBI-ProteinID:
ADB14501
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Position
1543292..1544317
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AA seq
341 aa
AA seq
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MSKNSISDVATLAGVSIATVSRTFAHPDKVTPATRAKVRQAAEQLDFTVSRTAGLLKSGK
SYRIALLIGSSRIEWFSASIIEGLNATLHAAGYDLVIYSVDGIEQRKTFFKELPLRGNTD
AVIVSSFDISNNEAEQLQRIKVPIVGINCVASKILSAAISIDDAAGIKLAVRHLTTLGHK
KILYVYEHFKSPLRFSSSRRITSFETICNDTPGVQGKILPIDFGDNPLDATISELFSSSN
PPTALCFHQDSTAIPFLFRLQKLGIRVPEDLSIIGFDNSTFAEALGLTTIRQNPCLMAQQ
AANIALALINEQPITRRHITAPLQLLIRNSTGPAPDITSAN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaacagtattagcgatgtagctacgctagcaggagtttccatagccactgtc
tctagaacttttgcccacccagacaaagtaacgccagcaacacgagcaaaagttaggcaa
gcagcagaacaactcgactttaccgtatcaagaaccgcaggattactgaaatcaggtaaa
tcataccgcatagcactactcattggtagcagtcgcatagaatggtttagcgcttctatt
attgaaggattaaacgctacgttgcacgcagccggatacgatctagtaatttattcagta
gatggtatcgaacagcgtaaaactttcttcaaagaactacctttacgcggtaatactgat
gccgtaatcgtatcttctttcgatatcagcaacaatgaggcagagcagcttcaacgcata
aaagtacctattgtgggcattaattgtgtagcgtctaaaattctttctgcagcaatcagc
attgacgatgctgcaggaattaaacttgcagtgcgccatcttactactttaggacacaaa
aaaatactgtatgtttacgaacattttaagtcaccacttcgcttcagctcttcaaggcga
atcaccagctttgaaacaatatgcaacgatacacccggagtccaagggaaaatcttacca
attgactttggagacaaccccttagatgccactatttcagaactattttcaagcagcaac
cctcctactgcactgtgctttcaccaagattccacagctataccattcctgtttcgttta
caaaaactaggcatacgagtgccagaagatttgtctattattggttttgacaatagtact
tttgcagaagcattaggcttaactaccattcgacaaaatccatgtctgatggctcagcaa
gccgcaaatattgctttagcacttattaacgagcagccaatcacaagacgccatattaca
gctccgcttcagcttctaatccgaaactcaactggtcctgccccagacattacatctgca
aactga
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