Gardnerella vaginalis HMP9231: HMPREF9231_0296
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Entry
HMPREF9231_0296 CDS
T01939
Name
(GenBank) ABC transporter, permease protein
KO
K10118
raffinose/stachyose/melibiose transport system permease protein
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HMPREF9231_0296
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gvh02000
]
HMPREF9231_0296
Transporters [BR:
gvh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
HMPREF9231_0296
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AEF31539
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Position
328894..329874
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AA seq
326 aa
AA seq
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MSAMENCTTKGSIDDTAVHRNDLSKMMMKNSGNNIGSWKTKIRPYLFIAPLVILSGFFIY
YCIGFTIATSFTDWDGISKEMDFIGLKNYIKLLVPNSIFWIALKNNIIFMVVTVFIQAAL
GLLLAVILKERLRGSSLFKAVFFMPIAMAPVIIAAIFRIIMDTNVGAINEALRFLHLGFL
SQSWLGNPRIALYSICAINIFEWMGFSMIIYYAGLMSIPDDIYEAAKIDGCGFWNTLFRI
TIPNLSGTTNTLILLGIVGSLKTFDIVIQTTGGGPSRSTEFLNTYLYKTGVQQFNGGLSA
SIGVMILIISVVLSIIQVVINDRSNR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatggaaaactgcacgactaaaggctctatagatgatactgctgttcatcgt
aacgacttgtctaaaatgatgatgaaaaatagtgggaataatattggctcttggaaaact
aagattcgtccatacttattcatagctccattggttatcctttcaggtttctttatctat
tattgcataggttttacaattgcaacttcattcactgactgggatggtatttcaaaggag
atggactttattggtttaaaaaactatattaagttgcttgttccaaattctattttctgg
atagcgttaaaaaacaatataatatttatggtagttactgtgttcatccaggctgcactg
ggtctgcttcttgctgttatcctcaaggaacgtttacgaggatctagtttatttaaagca
gttttctttatgccgattgcgatggctcctgttattattgctgctatttttcgaataatt
atggatactaatgtaggtgctattaatgaagcattgcgttttctacatcttggtttcttg
tcgcaaagttggttgggtaatccacgtatagcactttattctatatgcgctatcaatata
tttgagtggatgggcttttcgatgattatttattacgcaggtcttatgtcaattcctgat
gatatttacgaggcagctaaaatcgatggatgtggtttttggaatactctttttagaata
actattccaaatctttctggtactactaacactttgattcttttaggcattgtaggttct
cttaaaacttttgatattgttattcaaaccactggtggaggtcctagccgttctactgaa
ttcctaaacacttacctatataagacaggtgttcaacagtttaatgggggtctctctgca
tctattggagtaatgattctgattatttctgttgttctatcaataattcaagttgttatt
aatgatcgatctaacagatga
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