Gardnerella vaginalis HMP9231: HMPREF9231_1089
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Entry
HMPREF9231_1089 CDS
T01939
Name
(GenBank) penicillin-binding protein, transpeptidase domain protein
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00550
Peptidoglycan biosynthesis
gvh01100
Metabolic pathways
gvh01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF9231_1089
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HMPREF9231_1089
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gvh01011
]
HMPREF9231_1089
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gvh03036
]
HMPREF9231_1089
Enzymes [BR:
gvh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HMPREF9231_1089
Peptidoglycan biosynthesis and degradation proteins [BR:
gvh01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HMPREF9231_1089
Chromosome and associated proteins [BR:
gvh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HMPREF9231_1089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AEF31696
LinkDB
All DBs
Position
complement(1315735..1317828)
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AA seq
697 aa
AA seq
DB search
MSRQIKQRFAKYSGKVNGVVNSIKDKVNRTSNSSRFSKTSKSLKDGISRVFSLLKLIKRK
SQFTRFKKSSTYNANSYEAYGSYNRSAANKTAAMNSTVFAKKCVIVAIIFAFVATCAIVK
LSFIQLINARSTAQAAQAERIRTKPILARRGRILDTNGSVLAQSVERYNIIADPMNAQAF
KPTPCTKQTAGNCHSINGKDVEGTGAVAVARLLAPILHMSSVEIGGKISGLGRYAVIKRN
VKPSVKRAIDKLNLSGCVYAENSSERVYSSGPILGALIGSVKDAEESSRPEAKGRRGEIG
ESGLELSQDKVLTGTDGYQKYQGNNVGNEKIPGTVSEYKDAVNGNDIKLTIDSDVDWYVK
KVLLDGMKQYKAGWGIAVVQDIRTGEILALEDTDDIKAGSSAARASVSKAVSQTFEPGSI
GKVFAMAGMVQSGARQLSDKFSVPGTIDKQGQVFHDSHSHGIERLTLAGILKESSNVGMI
LAGEKYPNNKRYEFLSKFGIGQYTGLGLQGESPGLLPSVQAWDGRKQNTVLFGQGYATNA
LQITNAIATIANKGVRLQQSIIKSVIDPHGRVSEHKRPQATRVLDEHVASQMLNAMESTA
ESYKNFISINGYRVAAKSGTAEVAGFGGGLSSIVADCAGVIPVDNPRFAITVALSNPQGT
FGVVTAAPLLKAIGEFLMQKYDVPVSPPRSNPIAVEW
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccaaatcaagcaacgtttcgccaaatattcaggcaaagttaatggagttgtt
aattctattaaagacaaagttaatagaacaagtaattccagtagattttcaaaaaccagt
aagtctctaaaagacggtattagtcgcgtttttagcttactgaagctgattaaaagaaaa
tcgcaatttacaaggtttaaaaagtccagcacatacaatgcgaattcttatgaggcttac
ggatcctataataggtctgctgctaataagactgctgcgatgaatagcacagtttttgca
aagaagtgcgtaattgttgcaattatttttgcgtttgttgcaacatgtgcaatagtaaaa
cttagttttatacagcttattaatgctcgttctactgctcaggcggctcaagcagaacgt
attaggacaaaaccaattcttgctagaagaggtcgtattttagatacaaacggttcagtt
cttgctcaaagtgttgaaagatacaatataattgctgatcctatgaatgcgcaggcgttt
aaacctactccttgcacaaaacaaactgctggtaattgtcattcgattaatggtaaggat
gttgaaggtactggtgccgtggcagtggcacgtcttttagctccaattcttcatatgagc
tctgttgaaatcggcggaaagatttctggattgggtcgttacgcagttatcaagaggaat
gtgaagccttctgttaagcgtgcaattgacaaactcaacctttctggttgtgtctatgca
gaaaacagtagtgaacgagtgtattcaagtggtcctattttgggtgccctaattggttct
gtcaaagatgccgaagaaagctctagaccagaggcaaagggtagaagaggcgaaataggt
gaatctggattagagctttcgcaagataaagttttaactggtacagatggatatcaaaag
tatcagggaaacaatgttggaaatgagaaaattcctggcactgttagcgaatataaagac
gctgtaaatggtaatgacataaagttaaccattgacagcgatgtagattggtacgttaaa
aaagttcttctcgacggaatgaagcagtacaaagctggatggggaattgctgttgttcag
gatattcgcactggtgagattcttgcgttagaagatactgacgatattaaagctggttct
tcagctgctagagcatctgtttctaaagcggttagccagacctttgagccaggttctata
ggcaaagtgtttgccatggctggaatggttcaatctggtgcgcgtcaactcagtgacaaa
ttctcagttccagggacaatagacaaacaaggtcaggttttccatgattctcacagtcat
ggtattgaacgtttaacattagctggaattttaaaggaatcttctaatgttggcatgatt
ttagctggcgaaaaatatcctaataacaagcgttatgagtttttgtctaagtttggaatt
gggcaatatactggtttaggtttacaaggtgaatctcctggtcttcttccaagcgtacaa
gcatgggatggtcgtaagcaaaacactgttttgtttggtcagggttatgccactaacgct
ttgcaaattactaatgctattgcgactattgcgaacaagggtgtaaggctccaacagtca
ataatcaaatctgtaatagatcctcatggacgtgtctcagagcacaagagacctcaggca
actcgcgttttggatgaacatgtagcatcgcaaatgttgaatgctatggaaagcacagca
gaatcttacaagaactttatatcaattaatggataccgtgttgctgctaagagtggtact
gcagaagtagcgggattcggtggaggattaagttctattgttgcagattgtgctggagta
attcctgtggataatccacgatttgctattacagtggcattaagtaatcctcagggaact
ttcggcgttgttacagcagcacctcttttgaaagcaattggagaattcttgatgcaaaag
tatgatgttccagtttctcctcctcgtagcaaccctattgctgtagaatggtga
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