Gardnerella vaginalis HMP9231: HMPREF9231_1110
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Entry
HMPREF9231_1110 CDS
T01939
Name
(GenBank) ATP-binding cassette protein, ChvD family
Organism
gvh
Gardnerella vaginalis HMP9231
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
AAA_23
MMR_HSR1
RsgA_GTPase
Dynamin_N
AAA_16
AAA_22
NB-ARC
ATP-synt_ab
nSTAND1
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AEF31590
LinkDB
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Position
complement(1346268..1347944)
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AA seq
558 aa
AA seq
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MAEFIYQMIKARKSYGDRVILDDVTLSFLPGAKIGVVGPNGMGKSTLLKIMAGLENVSNG
EASITPGYTVGILQQEPPLDETKTVGENIKMAFGEIAQKVARFNQIGEEMANPDADFDAL
MEEMGKLQTEIDAANGWDLDSQLEQAMDALQCPDPDSPVSVCSGGERRRVALCKLLLEAP
DLLLLDEPTNHLDAESILWLEQFLHKYEGAVIAVTHDRYFMDNVAEWICEVDRGQLYPYK
GNYTTYLETKAKRMEIQGAKDAKLAKRLKNELDWVRSSPKARQAKNKARLERYDQMEQEA
RNSKKLDFSEIQIPAGPRLGSQVLEAKHIHKAFGDRVLIDDLSFTLPRNGIVGVIGPNGV
GKSTLFKTIVGLEPLSGGELTVGDTVKISYVDQNRAGLDPNKNLWEAVSGGLDFIEVAGV
EIPTRAYVASFGFKGSDQQKLTGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETL
ESLENALLDFPGCAVVVSHDRWFLDRVATHILAWEGDDENPAKWYWFEGNFQAYEENKIA
RLGEEAARPHRLHRKLTR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaatttatttaccaaatgattaaggcacgcaagtcttacggggatcgcgtgatt
ctagacgacgttaccttaagcttcctaccaggcgcaaagattggcgttgtagggcctaac
ggcatgggtaaatcaacgttgctgaagattatggctggtttggagaatgtatcaaacggc
gaggcttcgattacgccaggttataccgttggaattttgcagcaggagccacctctagat
gaaacgaagacggttggcgaaaacattaagatggcatttggtgagattgcgcaaaaagta
gcgcgttttaaccaaatcggcgaagagatggcaaatccagatgctgactttgatgcattg
atggaagaaatgggtaagttgcaaacagagattgatgctgcaaatggttgggatttggat
tctcagcttgagcaggcgatggatgctttgcaatgcccagacccagattcgcctgtttct
gtgtgctctggtggagaaaggcgtagagtggcgctgtgtaagcttcttcttgaagcccca
gatttgctgctgctggacgagcctacaaaccatttggacgctgagtctattctttggttg
gaacagttcttacacaagtatgaaggcgctgttattgctgtaacccatgatcgctacttt
atggataacgtagcagagtggatttgtgaagttgatcgtggtcagctttacccatacaag
ggcaattacaccacttacttggaaaccaaggctaagcgtatggaaatccagggtgctaag
gatgccaagcttgctaagcgcttaaagaatgagttggactgggtgcgtagctcgccgaag
gctcgtcaggctaagaacaaggctcgtttggagcgctacgaccaaatggagcaagaggca
cgcaattccaagaagcttgatttttcggagattcaaattcctgcaggtccacgcttggga
tcgcaagttttggaagcgaagcatattcacaaggcttttggagatcgcgtgttaatcgac
gatttgtcgtttactttgccgcgtaacggcattgttggcgtgattggtccgaacggcgtt
ggtaagtctacgcttttcaagacgattgttggcttggagccactttctggtggagagctt
acagttggagatactgtgaagatttcttacgtggatcagaatcgtgcaggattggatcct
aataagaacttgtgggaagctgtttcaggcggacttgattttattgaagttgcaggcgtt
gaaatccctactcgcgcatatgttgcaagctttggatttaaaggttcggatcagcagaag
cttacgggcgtgctttctggcggcgagcgtaatcgcttgaatttggctttaactcttaag
cagggcggcaacttgctgctgcttgatgagcctactaacgatttagatgttgagactctt
gaaagcttagagaacgctttgcttgacttcccaggttgcgctgtagtggtgagccacgat
cgttggttccttgaccgcgttgccacgcatattcttgcatgggaaggcgacgatgagaat
cctgcaaaatggtactggttcgaaggtaacttccaagcttacgaagaaaataagatcgca
cgccttggtgaagaagctgctcgtcctcatcgcttgcatcgtaagcttactcgctaa
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