Geobacillus sp. Y412MC52: GYMC52_0135
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Entry
GYMC52_0135 CDS
T01399
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gya
Geobacillus sp. Y412MC52
Pathway
gya03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gya00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GYMC52_0135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gya03021
]
GYMC52_0135
03400 DNA repair and recombination proteins [BR:
gya03400
]
GYMC52_0135
Enzymes [BR:
gya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GYMC52_0135
Transcription machinery [BR:
gya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GYMC52_0135
DNA repair and recombination proteins [BR:
gya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GYMC52_0135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ADU92650
UniProt:
A0A0E0T7I9
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All DBs
Position
143282..144226
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELSEDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIDGVVEDVTAIILNIKKLALKIYSDEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLHIATLAEGGRLRMRMTAKRGRGYVPAEANKREDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQVTDYDKLTIDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAQNAEIMVEK
EDDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEDMMKVRNLGRKSLEEVK
AKLAELGLSLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccgaaaattgaaacggtcgaactgagcgaagatgccaaatat
ggcaaattcgtcgtcgaaccgcttgagcgtggatatggtacaaccttagggaactccttg
cgtcgtatcctattgtcttcactccctggtgcagctgtaacatcggtgcaaatcgacggc
gtcttgcatgagttttcaacgattgacggcgtcgttgaagatgtgacagccatcattttg
aatatcaaaaaactagcgttgaaaatttattcagacgaagagaaaacgttggagattgat
gtgcagggtgaaggagttgtcacggctgccgatatcactcacgacagcgatgtagaaatt
ttaaacccggaccttcatatcgcgacgctggcggaaggcggccgcctgcgcatgcgcatg
accgccaagcgcgggcgcggatatgttcctgctgaggcgaataagcgcgaggaccagccc
atcggcgtcattccgatcgattccatttatacgccggtctcccgagtttcttatcaagtc
gagaatacaagggtcggccaagtgacggactatgacaaattgaccattgatgtgtggacg
gatggaagcatcgggccgaaagaggccatttcccttggagcgaaaattttaacggagcac
ttaaacatttttgtcggcttgacggatgaagcgcaaaatgcggagatcatggtcgagaaa
gaggacgatcaaaaagaaaaagtgctcgaaatgacgatcgaggaactcgatctttcggtt
cgttcctacaattgcttgaagcgggccggcatcaacactgttcaagaactgacgcaaaaa
acggaagaagatatgatgaaagtgcgcaacctcggccgcaagtcgcttgaggaagtgaaa
gcgaagctggctgagctcggcctcagcctgcgcaaagacgactaa
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