Halotalea alkalilenta: A5892_00105
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Entry
A5892_00105 CDS
T04333
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
haa
Halotalea alkalilenta
Pathway
haa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A5892_00105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haa03019
]
A5892_00105
03016 Transfer RNA biogenesis [BR:
haa03016
]
A5892_00105
Enzymes [BR:
haa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A5892_00105
Messenger RNA biogenesis [BR:
haa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A5892_00105
Transfer RNA biogenesis [BR:
haa03016
]
Prokaryotic type
tRNA degradation factors
A5892_00105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
ANF56067
UniProt:
A0A172YA23
LinkDB
All DBs
Position
complement(19934..22057)
Genome browser
AA seq
707 aa
AA seq
DB search
MNPVTKTFQYGGQTVTLETGRVARQATGSVLVTIDNTVVLCTAVARKDVKPGQDFFPLSV
HYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVICTVMSAD
KQHDPDIAAMLGTSAALAISGVPFAGPIGAARVAFNEDRGYFLNPSQAELASSELDMVVA
GTDKAVLMVESEAKELTEDEMLGAVLFAHQEMQVAIEAIKAFALEGSKPKWDWQPAVENV
ALKQAVAVGFEAGIGEAYRVTDKMARQDALAALKSQAIELLAGTGEFEADAVVGAFASLE
KRIVRERVLAGEPRIDGRDHKTVRPLSIQVGVLPRAHGSALFTRGETQAIVAATLGTLRE
AQLIEGLEGERHERFMFHYNFPPYSVGEAGFFGSPKRREIGHGRLAKRGVQAMVPNGDDF
PYSIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKDGDRFAVLTDI
LGDEDHLGDMDFKVAGSVNGVTALQMDIKIEGINEEIMERALNQAFEARQSILEQMNRVI
SESRSEVADHAPSMVLIKIDTDKIRDVIGKGGATIRQICEDTGASIDIQDDGTVRIYADT
KEGSKKAVDTVLAITAEAEINKLYRGKVVRIADFGAFVNFMPGTDGLVHISQIVPERVND
VRDFLNEGDMVTVKVLDVDNRGRVKLSIKEIEPAEKAAFEAGLGEGE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcccgtcaccaagaccttccagtacggcggtcagaccgtcacgctggagactggc
cgcgtcgcccgtcaagctactggcagcgtgctggtcaccatcgacaacaccgtagtcctc
tgcaccgcagtcgctcgcaaagacgtcaagccgggccaggacttcttccccctctccgtt
cactaccaggaaaagacctacgcggtcggcaagattcccggcgggttcttcaagcgcgaa
gggcgtccgaccgagaaggaaacgctgacctcacgtttgatcgatcggccgattcgtccg
ctgttccccaaagggttcatgaacgaagtgcaggtgatctgcacggtgatgtcagccgac
aagcagcatgatcccgacatcgcggcgatgcttggcacctccgctgcgctcgcgatcagc
ggcgtgcctttcgccggcccgattggcgccgcgcgcgtggccttcaatgaggatcgcggc
tacttcctcaacccgagccaggcggaactggcgagctccgagctcgacatggtcgtcgcc
ggcacggataaagcggtgctgatggtcgagtcggaagccaaagagctgaccgaagacgaa
atgctcggcgcagtgctcttcgcccaccaggaaatgcaggtcgcgatcgaggcgatcaag
gcattcgccctggaaggcagcaagccgaagtgggactggcagccagcggtcgaaaacgtc
gcgctcaagcaggcggttgccgtcggcttcgaagcgggcatcggtgaagcttaccgggtg
accgacaagatggcccgccaggacgcgctcgccgcgctcaagtcacaggcgatcgaactt
ctggccggtactggcgaattcgaggccgacgcggtggttggtgccttcgcttcgctcgag
aaacgcatcgttcgcgagcgggtcctggcgggcgagccgcgcatcgatggccgtgatcac
aagaccgtgcgtcccctgtcgatccaggtcggggtgctgccgcgcgctcacggctcggcg
ctgttcacccgtggcgagacccaggctatcgtcgccgcgactctcggtaccctgcgcgaa
gcgcagctgatcgagggcctcgagggcgagcgccacgagcgtttcatgttccactataac
tttcctccctacagcgtcggcgaggctggcttcttcggctcgccgaagcgtcgcgagatc
gggcacggacggttggccaagcgcggcgttcaggcgatggtgccgaacggcgacgacttc
ccctactcgattcgcgtggtctccgagatcactgagtccaacggctcgagctcgatggca
tcggtgtgcggctcttcgcttgccctgatggacgcaggcgtgccgctcaaggcgccggtt
gcgggtatcgccatgggcctggtcaaggatggcgatcgcttcgcggtgctcaccgacatc
ctcggtgacgaggatcacctcggtgacatggacttcaaggtcgcaggctcggtcaacggt
gtcaccgcactgcagatggacatcaagatcgaggggatcaacgaggagatcatggagcgt
gcactgaaccaagcgttcgaagcacgtcagagcatcctcgagcagatgaaccgggtgatc
agcgagagccgttcggaggtcgctgaccacgcgccctcgatggtgctgatcaagatcgac
accgacaagattcgcgacgtgatcggcaagggtggcgcgaccatccgccagatctgcgaa
gacaccggtgcctcgatcgacatccaggacgatggtacggtgcggatctatgccgatacc
aaggaaggctcgaagaaagcggtcgataccgtgctggcgatcaccgccgaagcggagatc
aacaagctgtaccgcggcaaggtagtgcggatcgccgacttcggcgcgttcgtcaacttc
atgccgggtaccgacggcctggtgcacatctcgcagatcgtgcctgagcgcgtcaacgac
gtgcgcgatttcctcaacgagggcgatatggtcaccgtcaaggtgctcgacgtcgacaat
cgcggacgcgtcaagctgtcgatcaaggagatcgaaccggccgagaaggcagcgttcgag
gcgggcctcggcgaaggagagtaa
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integrated database retrieval system
