KEGG   Halopseudomonas aestusnigri: LO767_05755
Entry
LO767_05755       CDS       T07924                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
haes  Halopseudomonas aestusnigri
Brite
KEGG Orthology (KO) [BR:haes00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:haes02044]
    LO767_05755 (tssC)
Secretion system [BR:haes02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LO767_05755 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UGV31984
LinkDB
Position
complement(1253799..1255274)
AA seq 491 aa
MQSQSTARANKPVTNGSLLDRVIAETQLPREDESYAIARRGVGAFISELLKPHNRQEPVK
KALVDRMIAEIDSKLSRQVDAILHHPDFQQLESAWRGLKLLVARTDFRENIRIELINASR
DDLLDDFEDSPELVQSGLYKHVYTAEYGQFGGQPVGAMIANYQFGPGTRDIRLLQQVAGV
AAMAHAPFIAAAGPAFFGLESFHGLPDLKDMQDHFEGPLFSKWQGFRESEDARYVGLTLP
RFLLRTPYDPEDNPVRSFAYRETVSDSHEDYLWGNAAFAFASRLTDSFARYRWCPNIIGP
QSGGAVDDLPLHHFSSMGEIETKIPTEVLVSDRREYELAEAGFIALTMRKGSDNAAFFSA
NSAQKPRYFGNSAEGKAAELNFRLGTQLPYLFIINRLAHYLKVLQREQIGAWKERTDLEL
ELNRWIRQYVADQDNPSAEVRGRRPLRAASIGVEDVAGQPGWYRVSLSVRPHFKYMGADF
TLSLVGKLDRE
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgcaaagccaatccaccgctcgggcaaacaagccggtgaccaacggcagtctgctcgac
cgcgttatcgccgaaacccagctgccccgggaggacgagtcctatgcgatcgcccgccgg
ggcgtgggcgccttcatcagcgaactgctgaaaccccacaaccgccaggagccagtcaag
aaggcactggtcgatcggatgatcgcagaaatcgacagcaagctgagccgtcaggttgac
gccatcctgcaccatcccgactttcagcagttggagtcggcctggcgcggcctgaagctg
ctggttgcacgcaccgactttcgggagaacatccgcatcgagctgatcaatgcctccaga
gatgatctgctggatgactttgaagacagcccggaacttgtgcagtccggtctttacaaa
cacgtatacacggccgagtacgggcagtttggtgggcagccggtcggcgccatgatcgcc
aactaccagtttggtccgggtacgcgggatattcgcctgctgcaacaggtggccggcgtg
gccgccatggcacacgccccgttcatcgcagcagccggccccgccttcttcggactcgag
agcttccacggcctgcccgacctgaaagacatgcaggaccatttcgagggcccgcttttc
agcaagtggcaggggttcagggagagcgaggatgcacgctatgtcggtctgacgctgccc
cgtttcctgctgcgcacaccctacgaccctgaagacaatccggtccgcagctttgcctac
cgcgaaacggtcagcgacagccatgaggactacctgtggggcaatgctgcattcgccttc
gccagccgcctgaccgacagtttcgctcgctatcgctggtgccccaacatcatcggtccg
cagagcggtggcgccgttgacgatttgccattgcatcatttctccagcatgggcgagatt
gaaaccaagatccccaccgaagtgctggtctcggaccgtcgagaatacgagctggcagaa
gcaggttttattgccctgaccatgcgcaagggcagcgacaatgcggcgttcttctccgca
aactcggcacagaaaccccgctacttcggcaacagcgccgagggcaaggcagccgaactc
aacttcaggctgggtacgcaactgccttacctgttcatcatcaaccgcctggcccactat
ctgaaagtgctgcaacgcgagcagatcggcgcctggaaagagcgcaccgacctggagttg
gaactgaaccgctggattcgccagtacgttgctgaccaggacaacccgagcgcagaggtg
cgcgggcgccgaccactgcgggcagcctccatcggcgtcgaggatgttgccggccagccg
ggctggtatcgggtcagtctcagcgttcgccctcacttcaagtacatgggcgccgacttc
acgctgtcgctggtcggcaagctggatcgcgaatga

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