Hahella sp. HNIBRBA332: O5O45_01940
Help
Entry
O5O45_01940 CDS
T09430
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
hahh
Hahella sp. HNIBRBA332
Pathway
hahh02020
Two-component system
hahh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hahh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O5O45_01940
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
O5O45_01940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hahh03000
]
O5O45_01940
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hahh02035
]
O5O45_01940
Transcription factors [BR:
hahh03000
]
Prokaryotic type
Helix-turn-helix
Other families
O5O45_01940
Bacterial motility proteins [BR:
hahh02035
]
Flagellar system
Flagellar assembly proteins
Others
O5O45_01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
AAA_7
nSTAND3
AAA_22
AAA
HTH_30
MCM
ATPase
AAA_3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
WLQ14695
UniProt:
A0AA50AN49
LinkDB
All DBs
Position
385688..387127
Genome browser
AA seq
479 aa
AA seq
DB search
MTSKDSTVLLVCDDDARRQAIEVILAFLGEPALATDADNWVKACKDASLSAADMAVALMD
ASVTSVEDFLAKLEEWDPGLPVLMLGERDLSEIDEDLRRKVIVQLEELPHYNKFMDSLYR
AQVYREQYAAKSGRGKQREILLFRSLVGTSRSVQKVRELMSQVADKEVSVLITGESGTGK
EVVARNLHYNSHRRNQPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRVGRFELAQGG
TLFLDEIGDMPLHMQVKILRVLQERTYERVGSSKTLEADVRIIAATHKNLEDMIERGDFR
EDLYYRLNVFPIEMPPLRERAEDVPLLINELISRMEKEKRGSIRFNSAAILSLCRHEWPG
NVRELANLVERLAIMHPYGVIGVQELPLKFRHVEDIEQGMEDLEEGYSGEPGLVGLNSPA
VLPVNGLDLKEYLANLEKSLIKQALDDSGGVVARAAERLHIRRTTLVEKVRKYNLNADE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaaagacagcactgtcctcttggtttgcgatgacgacgcgcgcagacaggcc
attgaagtgatactggcgtttctgggcgagcctgctctggccacggatgcggacaactgg
gtgaaagcgtgtaaggacgcctcattgagcgctgcggacatggctgtggcgttgatggac
gccagtgtgacgagtgtggaagattttctggcgaagctggaggaatgggatccgggcctg
cctgtgttgatgctgggggagcgtgatctgtctgaaatagacgaagacctgcgtcgcaag
gtcattgtccagctcgaagagctgcctcactataacaagttcatggacagcctgtatcgc
gcgcaagtgtatcgcgagcaatacgccgccaagagcggtcgcggcaaacaacgcgagatt
ttattgttccgcagcctggtcggcaccagccgtagtgtgcagaaggtgcgtgaactgatg
tcccaggtggcggacaaagaagtcagtgtgctgatcaccggcgagtccggcaccggtaaa
gaagtggtcgcgcgcaacctgcactataactcccatcgtcgcaatcaaccttttgttccc
gttaactgtggcgcgatccctgcggaacttctggaaagcgaacttttcggtcatgaaaaa
ggcgcgtttactggcgccatcacttcccgggtcggccgttttgaactggcgcagggcggc
acgttgtttctggatgagatcggcgacatgccgttgcacatgcaggtcaagattttaaga
gtgctgcaagagcgcacctatgaaagggtcggcagcagcaaaacgctggaagcggatgtg
cgcatcatcgccgccacgcataagaatctggaggatatgatcgaacggggcgacttccgg
gaagatctttactatcgcctcaacgttttccctatagaaatgccgccactgcgagagcgg
gcggaagacgtgccgctgctgatcaacgaattgatctcccgcatggagaaagaaaaacgc
ggctctatccgattcaattcagcggcgatcttgagcctgtgtcgtcatgaatggccgggt
aacgtcagagagctggcgaatctggttgaacggttggctatcatgcacccctacggcgtg
attggcgtgcaggaactaccgctgaaattccgtcatgtggaagatatcgaacagggcatg
gaagacctggaggaaggctactccggcgagcccggtttggtggggcttaattctccggcg
gtgttgcccgtgaatggattggacttgaaagagtatctcgccaatttggagaagagtctg
atcaagcaggccttggatgattccggcggtgtggtcgcccgcgcggcggaacgtttgcat
attcgccgcacgaccctggtggagaaagtacgtaagtacaatctcaacgctgacgaatag
DBGET
integrated database retrieval system
