Halomonas sp. KO116: KO116_02387
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Entry
KO116_02387 CDS
T03800
Name
(GenBank) exonuclease RdgC
KO
K03554
recombination associated protein RdgC
Organism
hak
Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hak03400
]
KO116_02387
DNA repair and recombination proteins [BR:
hak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KO116_02387
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
DUF5666
FAM91_N
Motif
Other DBs
NCBI-ProteinID:
AJY50862
UniProt:
A0A0D5M482
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All DBs
Position
2553228..2554157
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AA seq
309 aa
AA seq
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MWFKHLHLYRLHDAPELSSDALASALQEHAAKPLGNADARRLGWTAPAGRMGGGQLVHEI
QSHRLLSALRQERLLPASVVKEEVDELVADIEASESRKVTRKEKTAFKEQVTENLLPRAF
VRSQKIDLWWDTKGQMIGINASSRTRAEDILDLLRETLGSLKVTPLSSQTLPIRAMTTWL
GDVASRPADLQLGDQVELKAKGDDGVLRARQVDLDSDEIQQLLESGRQASKLAMSLEGRL
SFVLHDDLALKSLRFGDALIEEADHADDGDDALARLETDFILMAQALSTDIPRLIEWLGG
ETQREPAAQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttaagcacttgcatttataccgcctgcacgacgcgcccgagttatccagcgat
gcgctcgctagcgctttacaagagcatgccgccaaaccactcggtaacgctgatgcacgc
cgcctgggctggacagccccggctggacgtatgggcggcgggcagttagtgcacgaaatt
caatcgcaccgccttctttccgcccttcgccaagagaggctactgcctgcctcggtagtc
aaagaagaagtcgacgagctcgtcgccgatatcgaagccagcgaaagccgtaaagttacc
cgcaaagagaaaaccgcgtttaaagagcaggtgactgaaaatttgctgcctcgtgccttt
gttcgcagccagaaaattgatctttggtgggacaccaaaggccagatgatcggcatcaat
gccagctcgcgcacacgggccgaggatatcctggacttgctgcgcgagacgctaggcagt
ttgaaagtgactccgctgagttcgcaaacgttgcccattcgcgccatgaccacttggctg
ggcgatgtggctagccgccctgccgatctgcagctgggtgatcaagtcgagctcaaagcg
aaaggcgatgacggtgtgcttcgcgcgcgccaagtcgatttagacagtgatgaaattcag
cagttactcgaaagcggccgtcaggccagcaaactcgctatgagcttagaaggccggtta
agcttcgtgctgcacgatgatttagcgctgaaatcgttgcgctttggcgatgccctgatc
gaagaggccgaccatgctgacgacggtgacgatgcgctcgcccgcctggaaacagacttt
attttaatggcgcaggcactatctaccgatattccgcgcttgatagagtggctcggcggc
gagacgcagcgggaacccgcagctcaataa
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