Halomonas sp. KO116: KO116_02620
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Entry
KO116_02620 CDS
T03800
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hak
Halomonas sp. KO116
Pathway
hak03030
DNA replication
hak03430
Mismatch repair
hak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KO116_02620
03430 Mismatch repair
KO116_02620
03440 Homologous recombination
KO116_02620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hak03032
]
KO116_02620
03400 DNA repair and recombination proteins [BR:
hak03400
]
KO116_02620
Enzymes [BR:
hak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KO116_02620
DNA replication proteins [BR:
hak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KO116_02620
DNA repair and recombination proteins [BR:
hak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KO116_02620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AJY51095
UniProt:
A0A0D5M4E5
LinkDB
All DBs
Position
complement(2808193..2809179)
Genome browser
AA seq
328 aa
AA seq
DB search
MALTGVMPWHLATWHQLTRLADGGRMPHALLIHGAHGVGKQQLAEALIARTLCATPADQA
CGHCHSCAMLASGYHPDLLRVSPEEGKRQIRIDPIREVNRFVSQTAQQGGYRVIVISPAE
AMNVAAANALLKSLEEPGNKTLFILLSDVPSRMLPTIRSRCQQWSLPSVAFEACRGWLIE
KLNSADEAYFWWQVAGGLPLLAVELAAPEERALRHQIHDSFEQLVRGAEPVSEAARLDRQ
AIDAILWYGIAWLEDLIRLGLSGEAAVLHNPDLEPLYRQAVKNGRVQDWFRLLDYAREQR
RLLAVGANPNPQLVLEAWLVRWAALLRS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaccggtgttatgccgtggcaccttgccacctggcatcagttaacccgtctg
gccgatggagggcggatgccccatgcgctgctcattcatggcgcccatggggtaggtaag
caacagttggcggaggcgttaatcgcccggacactttgcgccactcctgccgaccaggcc
tgtggtcattgccatagctgcgctatgttggcatcgggatatcatcctgatttgctgcgg
gtctcgccggaagagggcaaacgccagattcgtattgaccctattcgcgaggttaaccgc
tttgtttctcaaacggctcagcaggggggataccgggtcatcgtcatttcaccggctgag
gcaatgaacgttgccgctgctaatgcgctgcttaaaagcctggaagagcccggcaataag
acgctgtttatcctgctctctgacgtgccttcacggatgctgccaacgatccgctcgcgc
tgtcagcagtggtccctgcccagtgttgcctttgaagcgtgtcgtggttggctgatcgag
aaactcaacagtgccgacgaagcctacttctggtggcaggtagcgggaggcctgccgcta
ctggcggtggagttggccgcgcccgaagagcgcgctttgcgccaccaaattcacgacagt
tttgagcagttggtgcgcggcgcagagccagtatcagaggccgcgcggctggatcgccag
gcgattgatgccattttgtggtacggtattgcctggctggaagacctgattcgtctcggt
ttatccggtgaagcagccgtgctgcacaatcccgatcttgagccgctttatcgtcaggcg
gtcaaaaatggccgggtgcaggattggtttcgcctgctggattatgcccgtgaacagcgg
cggctgttggcggtgggggctaacccaaatccccagttggtgcttgaggcgtggttggtt
cgctgggcggctctgctacgctcctag
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