Halobacterium salinarum NRC-1: VNG_2338G
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Entry
VNG_2338G CDS
T00038
Gene name
polA2
Definition
(GenBank) DNA polymerase type II large chain
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
hal
Halobacterium salinarum NRC-1
Pathway
hal03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VNG_2338G (polA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hal03032
]
VNG_2338G (polA2)
Enzymes [BR:
hal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VNG_2338G (polA2)
DNA replication proteins [BR:
hal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
VNG_2338G (polA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolC_DP2
Intein_splicing
HypA
TackOD1
Motif
Other DBs
NCBI-ProteinID:
AAG20443
UniProt:
Q9HMX8
LinkDB
All DBs
Position
complement(1746166..1750278)
Genome map
AA seq
1370 aa
AA seq
DB search
MRPTDETYFETLETGLDDAFEVAEAARERGEDPTPNVEIPVAKDMADRVENILGIDGVAE
RVRDLDGEMSREEAALELVADFVDGRVGDYDTDAGKIEGAVRTAVALLTEGVVAAPIEGI
DRVEVNDNDDGTQYVAVYYAGPIRSAGGTAQALSVLVADYARAMLGIDAFKPRDDEIERY
AEEVDLYDSETGLQYSPKDAETTFITEHCPVMLDGEATGNEEVDGFRDLERIDTNSPRGG
MCLVLAEGIALKAPKIQRYTRNLDEVAWPWLQDLIDGTIGADDADEDTPDAGSDSDATDE
GDAPSASTDAEEPPRAAPSDKFLRDLIAGRPVFGHPSKNGGFRLRYGRARNHGNATAGVH
PATMHLLDDFLATGTQIKTERPGKAAGIVPVDSIEGPTVKLANGDVRHINDPADALDVRN
GVAEILDVGEYLVNYGEFVENNHELAPASYAPEWWIQDLDAAGADVQALRDSPYVDLTAP
TADQAMAWATDYDAPLHPAYTYLWHDIDVEQFRALADAVADAHTDASDDDDRGVLVLDHT
TTVRETLEALLVTHHQGDDTIRVDDWLPLARSLGVTESLDREWETLSEAAAEWPNAVRAV
NEVAPFSVQERAPTRIGNRMGRPEKSESRDLSPAVHTLFPIGDAGGSQRDVADAARYAPD
MSDTPGEIPVRVGDRVCPSCDEHTYESRCPDCGDWTDPHYECRDCGAVATPDESGRVECP
NCGRDLDNVTTQVIDINDEYHGALRAVGERENAFDQLKGVKGLLSAEKTPEPMAKGVLRA
KHDVTAFKDGTVRYDMTDLPVTAVTPAELDVTAGQFRELGYNQDIHGDPLEHDDQLVELR
VQDVVLSDGAADHMLKTADFVDDLLTQYYGLDAFYDLDDRDDLVGELVFGMAPHTSAAVV
GRVAGFTSASVGYAHPYFHAAKRRNCFHPETNVWFRDESGEWHHDPIETLVEARLDPDTA
DEDDFGALVQALDGDVFVPSVTEDGEETLQRVEAVSKHPAPDHLLAVETKRGRELTVTPD
HSMRRWTGDGIERVDARELTAGDALPAPTQVPGDGETATSELRSESLDGTHPQRRFGDGG
SVRTDEVVSVEPVRSSVDHTYSLTVAETNTLVANGLFTGQCDGDEDCVMLLMDGLINFSK
SYLPDKRGGRMDAPLVMSSRIDPAEIDDEAHNIDIDREYPREFYEATRELADPEDVADLI
TLAESTVGTDEEYTGFGHTHATSNIHLGPSLSAYKTLGSMMDKMDAQLELARKLRSVAET
DVAERVIEYHFLPDLIGNLRAFSRQETRCLDCGEKYRRMPLSGDCRECGGRVNLTVHEGS
VNKYMDTAMRVATEYDCREYTKQRLEIMDRRLESVFEDDTNKQSGISDFM
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccaccgacgaaacctacttcgaaacgctggaaaccggcctcgacgacgccttc
gaggtcgcggaagccgcccgggaacgcggggaagacccgacgccgaacgtcgaaatcccg
gtcgcaaaggacatggccgaccgcgtcgagaacatcctcgggatcgacggcgtcgccgag
cgcgtccgcgatctcgacggcgagatgagccgcgaggaggccgcgctggagctcgtcgcg
gacttcgtcgacggccgcgtcggcgactacgacaccgacgccggcaagatcgagggcgcg
gtccgcaccgcggttgcactgctcactgagggcgtggtcgcggcccccatcgagggcatc
gaccgcgttgaagtcaacgacaacgacgacggcacccagtacgtcgcggtctactacgcc
ggccccatccggtcggccggcggcaccgcgcaggcgctctcggtgctcgtcgccgactac
gcgcgtgcgatgctcggcatcgacgcgttcaaaccccgcgacgacgagatcgagcgctac
gccgaggaggtcgatctctacgactccgagaccggtctccagtactccccgaaggacgcc
gaaaccacgttcatcaccgaacactgtccggtgatgctggacggcgaagcaaccggcaac
gaggaggtcgatgggttccgcgacctcgaacgcatcgacaccaactccccgcggggcggc
atgtgtctcgtgctcgcggagggcatcgcgctgaaagcccccaagatccagcgctacacc
cggaacctcgacgaagtcgcgtggccgtggctccaggacctcatcgacggcaccatcggc
gccgacgacgccgacgaagacaccccggacgccggcagcgacagcgacgcaaccgacgag
ggggacgcccccagtgcgagcaccgacgccgaggagccaccccgcgccgccccctcggac
aagttcctccgcgacctcatcgcgggccggccggtgttcggccatccctccaaaaacggc
gggttcaggctgcgctacgggcgtgcgcgaaaccacgggaacgcgaccgcgggcgtccac
ccggcgacgatgcacttgctcgatgacttcctcgcgacgggcacccagatcaagaccgaa
cgccccgggaaggccgcgggcatcgtccccgtcgactccatcgaggggccgacggtgaaa
ctcgccaacggcgacgtccgccacatcaacgaccccgcggacgccctcgacgtccgcaac
ggcgtcgcggagatcctcgacgtcggcgaatacctcgtgaactacggggagttcgtggag
aacaaccacgagctcgcgcccgcctcgtacgcccccgagtggtggattcaggacctcgac
gccgcgggcgcggacgtgcaagccctccgggactcgccgtacgtcgatctcaccgccccc
accgccgatcaagccatggcgtgggcgaccgactacgacgccccgctgcacccggcgtac
acgtacctctggcacgacatcgacgtcgagcagttccgcgcgctcgccgacgccgtcgcc
gacgcccacaccgacgccagcgacgacgacgaccgcggtgtgctcgtgctcgatcacacc
accaccgtgcgcgagacgctcgaagcgctcctggtcacccaccaccagggcgacgacacc
atccgggtcgacgactggctgccgctggcgcgctcgctcggcgtcaccgaatcgctcgac
cgggagtgggagacgctctctgaggccgccgccgagtggcccaacgccgtccgcgcggtc
aacgaagtcgcgccgttcagcgtccaggagcgcgcccccacacgcatcgggaaccgcatg
ggccgccccgagaaatccgaatcccgcgatctctcgccggccgtccacaccctgttcccc
atcggcgacgccggcggcagccagcgcgacgtcgccgacgccgcgcggtacgcgccggac
atgtccgacacgcccggcgaaatccccgtccgggtcggcgaccgcgtctgtccgtcctgc
gacgagcacacctacgaatcgcggtgccccgactgcggggactggaccgacccccactac
gagtgccgggactgcggtgccgtcgccacccccgacgagtccgggcgcgtcgaatgcccg
aactgcgggcgggacctcgacaacgtcaccacacaggtcatcgacatcaacgacgaatac
cacggcgcgctccgcgccgtcggcgagcgcgagaacgccttcgaccaactcaaaggcgtc
aagggactgttatccgcggagaaaacccccgaacccatggcgaaaggcgtcctgcgcgcg
aaacacgacgtcaccgcgttcaaggacggcactgtccgctacgacatgaccgacctcccg
gtgaccgccgtcacacccgcggagctcgacgtcactgccgggcagttccgcgaactcggc
tacaaccaggacatccacggcgaccccctcgaacacgacgaccaactggtcgaactccgc
gtgcaggacgtggtgctctccgacggcgcggccgaccacatgctcaagaccgcggacttc
gtcgacgacctcctcacccagtattacggcctcgacgccttctacgacctcgacgaccgc
gacgatctcgtcggcgaactcgtcttcggcatggcaccccacacgtcggccgccgtcgtc
ggccgcgttgccggcttcacctccgcgtccgtcggctacgcccacccctacttccacgcc
gcgaaacgccggaactgcttccacccggagacgaacgtctggttccgcgacgagtccggg
gagtggcaccacgacccgatcgagacgctcgtcgaggcgcgactcgatcccgacacggcc
gacgaggacgacttcggagccctcgtgcaggccctcgacggcgacgtgttcgtgccctcg
gtgaccgaggacggcgaggagaccctccagcgagtcgaagccgtctccaaacaccccgcc
ccggaccacctcctcgcggtcgagacgaaacgcggccgggaactgaccgtgacccccgac
cactcgatgcgtcggtggaccggggacggcatcgaacgcgtcgacgcccgggaactgacg
gcgggcgacgctctccccgcaccgacacaggttccgggcgacggcgagacggcgacgtcc
gagctgcgttccgagtccctggacggcacacacccgcagcgacgcttcggtgacggcggc
agcgtccggaccgacgaggtcgtgtccgtcgaaccggtccgatccagcgtcgaccacacg
tactccctgaccgtcgcggagaccaacacgctcgtcgcaaacggcctgttcaccgggcag
tgcgacggcgacgaggactgcgtgatgctgctgatggacggcctgatcaacttctcgaag
tcgtacctgccggacaagcgcggcggccggatggacgcgccgctggtgatgtcctcccgc
atcgaccccgcggagatcgacgacgaagcccacaacatcgacatcgaccgcgagtacccc
cgggagttctacgaggcgacccgggagctggccgaccccgaggacgtggcggacctcatc
accctcgcggagtcgacggtcggcaccgacgaagagtacaccggcttcgggcacacccac
gccacctccaacatccacctggggccgtcgctgtcggcgtacaagaccctggggtcgatg
atggacaagatggacgcccaactggagttggcccgcaaactccggtcggtcgccgaaacc
gacgtcgccgaacgcgtcatcgagtaccacttcctcccggacctcatcgggaacctgcgc
gcgttcagccgccaggaaacccggtgtctggactgtggggagaaataccgccgcatgccg
ctcagcggcgactgccgggagtgcggtgggcgcgtgaacctcacggtccacgagggttcc
gtaaacaagtacatggacaccgccatgcgggtcgccaccgagtacgactgccgggagtac
acgaaacagcgcctcgaaatcatggaccgacgcctggaatccgtcttcgaggacgacacc
aacaagcaaagcggcatctccgatttcatgtga
DBGET
integrated database retrieval system
