Haloferax alexandrinus: G3A49_17195
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Entry
G3A49_17195 CDS
T06450
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hale
Haloferax alexandrinus
Brite
KEGG Orthology (KO) [BR:
hale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hale03019
]
G3A49_17195
03009 Ribosome biogenesis [BR:
hale03009
]
G3A49_17195
04131 Membrane trafficking [BR:
hale04131
]
G3A49_17195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hale04147
]
G3A49_17195
Messenger RNA biogenesis [BR:
hale03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
G3A49_17195
Ribosome biogenesis [BR:
hale03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
G3A49_17195
Membrane trafficking [BR:
hale04131
]
SNARE
SNARE associated proteins
Others
G3A49_17195
Autophagy
Aggrephagy
Other aggrephagy associated proteins
G3A49_17195
Exosome [BR:
hale04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
G3A49_17195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
TIP49
AAA_14
AAA_22
AAA_33
nSTAND3
RNA_helicase
AAA_7
AAA_28
IstB_IS21
Mg_chelatase
AAA_3
AAA_18
NB-ARC
DUF815
AAA_17
AAA_30
SLFN-g3_helicase
Sigma54_activat
Parvo_NS1
Zeta_toxin
PhoH
AAA_24
AAA_11
TsaE
ABC_tran
AAA_19
bpMoxR
Bac_DnaA
ATPase_2
ATP-synt_ab
Zot
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QIB79741
UniProt:
A0A6C0UZ91
LinkDB
All DBs
Position
complement(3464162..3466426)
Genome browser
AA seq
754 aa
AA seq
DB search
MKLIVKPLKQKDAGRGLAAIDRAAAAELDLEGGDFIRIDGPNDGTAIARVWPGYPEDQGT
GIIRIDGRLRQQAGVGIDERVDVEKADVKPAQRVTIALPQNLRIGGNIGTYIRDKLSGQP
VAQGQSVQLPLGFGFMSASNQSVPIKIASTDPDGTVVVTDNTEFQVSQKPAEQISESAPG
DDGGPSVTYEDIGGLDKELEQVREMIELPMRHPELFKRLGIEPPKGVLLHGPPGTGKTLI
AKAVANEIDASFHTISGPEIMSKYYGESEEQLREIFEEATENSPAIVFIDEIDSIAPKRS
EAGGDVERRVVAQLLSLMDGLDERGEVVVIGATNRVDAIDNALRRGGRFDREIEIGVPDR
DGRKEIMQVHTRNMPLTDDVDLDEYADSTHGFVGADLESLAKESAMHALRRIRPQLDLDA
EEIDAEVLEGLKVTEDDFKQALKSIEPSALREVFVEVPDVTWEDVGGLEPTKERLRETIQ
WPLEYPEVFQQMDMDAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKFVGE
SEKGVREVFKKARENAPTVVFFDEIDSIATERGRDSSSSGVTERVVSQLLTELDGLEALE
DVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEDARRAILDVHTREKPLADDVDLDKI
ASKTDGYVGADLEALAREASMNASREFIRSVEKEEIGESVGNVRVTMDHFEDALDEIGAS
VTDDVRRRYEEIEERFQKSEVERDRETEVGRTFQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcatcgtcaaacccctcaaacagaaggacgccggccgcgggctcgccgccatc
gaccgagccgcggccgcggaactcgacctcgaaggcggggatttcatccgcatcgacggt
ccgaacgacgggaccgccatcgcccgcgtctggcccggctaccccgaagaccaggggacg
ggaatcatccgcatcgacggccgcctccgccagcaggccggcgtcggcatcgacgagcgc
gtggacgtggagaaagcggacgtgaagcccgcacagcgcgtcaccatcgcgctcccgcag
aacctccgcatcggcggcaacatcgggacctacatccgcgacaagctctcgggccagccg
gtcgcacagggccagagcgtccagctcccgctcggcttcggcttcatgagcgcgtcgaac
cagtcggtccccatcaaaatcgcgtcgacggaccccgacgggaccgtcgtcgtcaccgac
aacaccgagttccaggtgagccagaagcccgccgagcagatttcggagtccgcgccgggc
gacgacggcggtccttccgtcacctacgaggacatcggcggcctcgacaaggagctcgaa
caggtccgggagatgatagagctcccgatgcgccaccccgaactgttcaagcgcctcggc
atcgagccgccgaaaggcgtgctcctccacggcccgccggggacgggcaagaccctcatc
gcgaaggccgtcgccaacgaaatcgacgcctcgttccacaccatctccgggccggagatt
atgtcgaagtactacggggagtccgaagagcagctccgggaaatcttcgaggaggcgacg
gagaactcgccggccatcgtcttcatcgacgagatagactccatcgcgcccaagcgcagc
gaggccggcggtgacgtggagcgccgcgtcgtcgcccagctgctgtcgctcatggacggc
ctcgacgagcgcggcgaggtcgtcgtcatcggcgcgaccaaccgcgtggacgccatcgac
aacgcgctccgccgcggcggccgcttcgaccgcgaaatcgaaatcggcgtcccggaccgc
gacggccgcaaggagatcatgcaggtccacacgcggaacatgccgctgaccgacgacgtg
gacctcgacgaatacgccgacagcacccacggcttcgtcggggccgacctcgaatcgctg
gccaaggagtcggcgatgcacgccctgcggcgcatccgcccgcagctcgacctcgacgcc
gaggagatagacgccgaggtgctcgaaggcctcaaagtcacggaagacgacttcaaacag
gcgctcaagagcatcgaaccctccgcgctccgcgaggtgttcgtcgaggtgcccgacgtg
acgtgggaggacgttggcggactcgaaccaaccaaagagcgcctccgcgagaccatccag
tggcccctcgaataccccgaggtgttccagcagatggacatggacgccgccaagggcgtc
ctgatgtacggcccgccgggcacggggaagaccctgctggcgaaggccgtcgccaacgag
gcggagtcgaacttcatctccatcaagggccccgaactcctgaacaagttcgtcggcgag
tccgaaaagggcgtccgcgaggtgttcaagaaggcccgcgagaacgccccgacggtggtg
ttcttcgacgaaatcgactccatcgcgaccgagcgcggccgcgactcgtcgagttcgggc
gtcaccgagcgcgtcgtctcccaactgctcaccgaactcgacggtctcgaagcgctcgaa
gacgtggtcgtcatcgcgacgaccaaccggccggacctcatcgactcggcgctcctgcgc
cccggtcgcctcgaccgccacgtccacgtgcccgtgcccgacgaggacgcccgccgcgcc
atcctcgacgtgcacacccgcgaaaagccgctcgcggacgacgtggacctcgataaaatc
gcgtcgaagaccgacggctacgtcggtgccgacctcgaagcgctcgcccgcgaggcgtcg
atgaacgcctcccgcgagttcatccggagcgtcgagaaagaggaaatcggcgagagcgtc
ggcaacgtccgcgtgacgatggaccacttcgaggacgccctcgacgaaatcggcgcgagc
gtcaccgacgacgtgcgccgccgctacgaggaaatcgaagagcgcttccagaagagcgag
gtcgaacgcgaccgcgagacggaagtcggtcggaccttccagtaa
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