KEGG   Haloarcula sp. JP-L23: G9465_11910
Entry
G9465_11910       CDS       T06489                                 
Symbol
tfe
Name
(GenBank) transcription factor E
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
halj  Haloarcula sp. JP-L23
Pathway
halj03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:halj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    G9465_11910 (tfe)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:halj03021]
    G9465_11910 (tfe)
Transcription machinery [BR:halj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     G9465_11910 (tfe)
 Prokaryotic type
  Archaeal type
    TFE
     G9465_11910 (tfe)
SSDB
Motif
Pfam: TFIIE_alpha Sigma70_r3 zf-ribbon_3 Zn-ribbon_8 DZR HypA LysW-like_globular NRDD zinc-ribbons_6 RUBY_RBDX
Other DBs
NCBI-ProteinID: QIO23015
LinkDB
Position
2328290..2328820
AA seq 176 aa
MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYDKIPEQLEEEMYRLLDGLEERRQYERDNEFYLCE
HCGIRFEFGEAMEFGFECPECGNQIDAMENTRLVTAMEERIDELRDELNVETEAEA
NT seq 531 nt   +upstreamnt  +downstreamnt
atggcttttgaggatctcctggaggacccggttatacagaagtacctccacgagctagtc
ggaccgaaagggatgccggttgccgccgcgccgccggacggcgaagtgaccgacgaggaa
ctggccgaggagctcggactcgaactcaacgacgttcgccgagcgctgttcatcctctac
gagaacgatctggcgtcgtatcgacgcctccgcgacgaggactcggggtggctcacctac
ctctggacgttcgagtacgacaagatacccgaacaactagaggaggagatgtaccgcctg
ctcgacggcctcgaagagcgccgtcagtacgagcgcgacaacgagttctatctctgtgag
cactgcggcatccgcttcgagttcggggaagcgatggagttcggcttcgagtgccccgag
tgtggcaaccaaatcgacgccatggagaacacccgcctcgtgaccgccatggaggagcgc
atcgacgaactgcgcgacgaactgaacgtcgagacggaagctgaggcctga

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