Haloarcula sp. JP-L23: G9465_11910
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Entry
G9465_11910 CDS
T06489
Symbol
tfe
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
halj
Haloarcula sp. JP-L23
Pathway
halj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G9465_11910 (tfe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halj03021
]
G9465_11910 (tfe)
Transcription machinery [BR:
halj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
G9465_11910 (tfe)
Prokaryotic type
Archaeal type
TFE
G9465_11910 (tfe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sigma70_r3
zf-ribbon_3
Zn-ribbon_8
DZR
HypA
LysW-like_globular
NRDD
zinc-ribbons_6
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
QIO23015
LinkDB
All DBs
Position
2328290..2328820
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AA seq
176 aa
AA seq
DB search
MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEELGLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYDKIPEQLEEEMYRLLDGLEERRQYERDNEFYLCE
HCGIRFEFGEAMEFGFECPECGNQIDAMENTRLVTAMEERIDELRDELNVETEAEA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggatctcctggaggacccggttatacagaagtacctccacgagctagtc
ggaccgaaagggatgccggttgccgccgcgccgccggacggcgaagtgaccgacgaggaa
ctggccgaggagctcggactcgaactcaacgacgttcgccgagcgctgttcatcctctac
gagaacgatctggcgtcgtatcgacgcctccgcgacgaggactcggggtggctcacctac
ctctggacgttcgagtacgacaagatacccgaacaactagaggaggagatgtaccgcctg
ctcgacggcctcgaagagcgccgtcagtacgagcgcgacaacgagttctatctctgtgag
cactgcggcatccgcttcgagttcggggaagcgatggagttcggcttcgagtgccccgag
tgtggcaaccaaatcgacgccatggagaacacccgcctcgtgaccgccatggaggagcgc
atcgacgaactgcgcgacgaactgaacgtcgagacggaagctgaggcctga
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integrated database retrieval system