Haloprofundus sp. MHR1: FCF25_09395
Help
Entry
FCF25_09395 CDS
T05952
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
halm
Haloprofundus sp. MHR1
Pathway
halm03030
DNA replication
halm03420
Nucleotide excision repair
halm03430
Mismatch repair
halm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
halm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCF25_09395
03420 Nucleotide excision repair
FCF25_09395
03430 Mismatch repair
FCF25_09395
03440 Homologous recombination
FCF25_09395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
halm03000
]
FCF25_09395
03032 DNA replication proteins [BR:
halm03032
]
FCF25_09395
03400 DNA repair and recombination proteins [BR:
halm03400
]
FCF25_09395
Transcription factors [BR:
halm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
FCF25_09395
DNA replication proteins [BR:
halm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
FCF25_09395
DNA repair and recombination proteins [BR:
halm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
FCF25_09395
MMR (mismatch excision repair)
FCF25_09395
DSBR (double strand breaks repair)
HR (homologous recombination)
FCF25_09395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
Motif
Other DBs
NCBI-ProteinID:
QCJ47314
UniProt:
A0A4D7H889
LinkDB
All DBs
Position
1857150..1858655
Genome browser
AA seq
501 aa
AA seq
DB search
MGAIEEVYEDLDTEVEFEEFEAAVEEKVEQMGGLADEETAAMLIAHELRDEEVNGIADVE
PGMDEVKFLAKVVSVGELRTFERDGEDEDGRVVNVEVADETGRIRVSFWDEIAESIADGE
LEVGQVLRIKGRPKDGYNGVEVNVDQAEPDPDAEVDVQILDSYRVEDISLGLSDVNLKGQ
VLDSGTVRTFSRDDGSEGRVSNLALGDPTGRIRVTLWDDKADLAEEFSAGESVEVVDGYV
RERDGNLELHVGSRGAIERLDETVQYVPETTDIGSLEIGQTVDIAGGVVEADPKRTFERN
DGSEGQVRNIRVKDDTGDVRVALWGEKADTEVELADHVVLADVEIKDGWQEDIEASAGWR
STVTVQKDAPVSGSSEDDAASNANAGGLSAFGGESDGNPDAPDSSESVDSSESVDGSESA
GGSGSSAASGAATAAVGAETENADGETVEFTGTVVQAGDPVILDDGTETRSVDTGAKLRL
GETVTVRGTLSGDRIDVDEVL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgatagaagaggtgtacgaggacctcgacaccgaggtcgagttcgaggagttc
gaggccgcggtcgaagagaaggtcgagcagatgggcggcctcgccgacgaggagacggcg
gcgatgctcatcgcccacgaactccgcgacgaggaggtcaacggcatcgccgacgtcgaa
ccggggatggacgaggtgaagttcctcgccaaggtcgtcagcgtcggcgagctccggacg
ttcgagcgcgacggcgaggacgaggacggccgcgtcgtcaacgtcgaagtcgccgacgag
acgggccgaatccgcgtctccttctgggacgagatagccgagtccatcgccgacggcgaa
ctcgaagtcggccaggtgctccgcatcaagggccgtccgaaagacggctacaacggcgtc
gaggtgaacgtcgaccaggccgaaccggaccccgacgccgaagtcgacgtgcagattctc
gacagctaccgcgtcgaagacatctcgctcggactctcggacgtgaacctcaagggccag
gtgctcgacagcggcaccgttcgcaccttctctcgcgacgacggttcggaaggtcgcgtc
tcgaacctcgcgctcggcgacccgaccggacggatccgcgtcacgctctgggacgacaaa
gccgacctcgccgaggagttcagtgccggcgagagcgtcgaagtcgtcgacggctacgtc
cgcgaacgcgacggcaacctcgaacttcacgtcggctcgcggggggcaatcgagcgcctc
gacgagaccgtccagtacgtccccgagacgaccgacatcggttcgctcgaaatcggacag
accgtcgacatcgccggcggcgtcgtcgaggccgaccccaaacggacgttcgagcgcaac
gacggctccgagggacaggtcagaaacatccgcgtgaaggacgacaccggcgacgttcgc
gtcgctctctggggggagaaagccgacaccgaggtcgaactcgccgaccacgtcgtcctc
gccgacgtggagataaaggacggctggcaggaggatatcgaggcctcggccgggtggcgc
tcgaccgtgaccgtccagaaggacgccccggtttccggttcgagcgaagacgatgcggcc
tcgaacgcgaacgccggaggtctctcggcgttcggtggcgagtcggacgggaaccccgac
gcccccgacagctccgagagcgtcgacagctccgagagcgtcgacggctccgagagcgcc
ggcggttcgggcagctcagcggccagcggcgccgccaccgcagcagtcggagccgaaacc
gagaacgccgacggcgagacggtcgaattcaccggcaccgtggtccaggctggcgacccc
gtcatcctcgacgacggaaccgagacgcgaagcgtcgacaccggcgcgaagctccgactc
ggcgagacggtcaccgtccgcgggacgctctcgggcgaccgcatcgacgtcgacgaagtg
ctctga
DBGET
integrated database retrieval system
