Halomonas sp. R57-5: HALO2200
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Entry
HALO2200 CDS
T04029
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ham03016
]
HALO2200
Enzymes [BR:
ham01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HALO2200
Transfer RNA biogenesis [BR:
ham03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HALO2200
Prokaryotic type
HALO2200
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Motif
Other DBs
NCBI-ProteinID:
CEP35882
UniProt:
A0A0D6E8R6
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All DBs
Position
I:2379305..2380243
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AA seq
312 aa
AA seq
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MTLFYHFDEKIPLTGRLAMGIEYDGTRYCGFQRLNHAASVQASLEDALSKVANESIRVNA
SGRTDSGVHATRQIVHFDPPVGRSEKAWIFGANTQLPRDIAVRWVKPVGDDFHSRLCALG
RRYRYVLLNQISRPVLERANVXWCRDPLDADAMHRAAQALVGEHDFSSFRAAGCQSKSPW
RHMHFVDVKRYGQLVMIDIQGNAFLHHMIRNIAGALVSVGRGAQSETYIGELLALQNRRK
GDVTAPACGLHFVDSVYDERFDLPKEPLGPHLLSFTGEWTGERELPDTPRIAYRRNRSLR
HPAANPEQEVPS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgttctatcacttcgatgagaaaattccgcttactggccgcttggcaatgggt
atcgagtacgacggtacccgctactgcggttttcagcgcttaaaccacgccgcatcggtt
caggcgtcgctagaggatgcgctgtccaaggtggccaatgagtccattcgggtgaacgct
agcgggcgcacagattcgggtgtgcacgcgacgcgccaaatcgttcattttgacccgccg
gtggggcgctctgaaaaagcctggatctttggcgctaatacccagttgccccgcgatatc
gccgtgcgttgggtaaagcccgtaggcgacgacttccactcacgcctgtgtgccctgggg
cgccgttaccgctacgtgctgctgaaccagattagtcgccccgtattagagcgggccaat
gtgmcctggtgccgggatccgttagacgccgatgccatgcaccgggccgcccaggcgctg
gtaggggagcatgatttttccagcttccgcgccgctggctgtcaatcgaaatccccctgg
cggcatatgcactttgtcgacgtaaagcgctacggccaactggtgatgatcgatattcaa
ggcaatgcgtttttgcaccatatgattcgtaacatcgccggggcactggtgagtgtaggg
cgtggtgctcagagtgagacctatattggcgaactgctggcgctgcaaaaccgccgcaaa
ggcgatgtcaccgcgcctgcttgtgggttgcattttgtcgattcggtttacgatgagcgc
tttgatctgcccaaagagccgctggggccgcatctgctctcatttaccggtgaatggacc
ggggagcgcgagttgcctgatacgccgcggatagcttatcggcgcaatcgttcgcttcgc
catccggctgctaaccctgagcaggaggtgccgtcatga
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