Helianthus annuus (common sunflower): 110870212
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Entry
110870212 CDS
T05101
Name
(RefSeq) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110870212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
han03019
]
110870212
03400 DNA repair and recombination proteins [BR:
han03400
]
110870212
Enzymes [BR:
han01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110870212
Messenger RNA biogenesis [BR:
han03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
110870212
DNA repair and recombination proteins [BR:
han03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
110870212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
HRDC
ResIII
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
110870212
NCBI-ProteinID:
XP_021975105
LinkDB
All DBs
Position
1:80960852..80969265
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AA seq
853 aa
AA seq
DB search
MKMESTLKEYFGFSTFRPYQKEIIEKILEGRDCLVVMATGSGKSLCYQVPPLISNKTAIV
ISPLISLMQDQVMALKQRGIKAEHLSTAQTNTNAQKNAESGQYDILYMTPEKACFVPNSF
WSRLLATGICLVAVDEAHCISEWGHDFRVEYKQLYKLRDVLQNVPFVGLTATATEKVRKD
ITDSLKMKDPHIAIGSFDRKNLYYGVKSINRGPLFVNELVAQISKYATNGGSTIVYCTTV
KDVQEITASLCGAGIKAGMYHGQMANKAREQSHRSFIRDEVDVMVATIAFGMGIDKPDIR
HVIHYGCPKSLESYYQESGRCGRDGVASDCWLYFSRADFGKAEFYCGEASSATQKKAIMD
SFMAAQRYCMQTTCRRKILLEYFGETFASSNCGNCDNCTNAKEESDMSREAFLLMGCIQA
CGGYWGLNLPIDVLRGSRAKKITENQFDNLPFHGLGKDFSVNWWKSLGFQLISFGYLVET
VKDTYRTVSVGPEGAKFLRSCRPDHQPPLLLPITSESGGNDDIKAGSEHDGLSQAEVELY
KILLEERMKLARSAGTAPYAVCGDLTLKKIVATRPSTKARLANIDGVNQHLVTKYGDHLL
QSIQQLSKQLDLSLDGVAAIEANNNGKASTTPKQPKDLQPAKYSAWKMWQEDGLSAEKIA
NFPGRSAPIKVGTVLGYVLDAAREGCMVDWARLFEEIGLTREIFAQIQAAVLKVGSKDKL
KPIKDELPEEVEYFQIKAFLTMQDLGLSSEAINGNKTQELSEKSINEKSEVVIIDESPRK
RMKIDVPEEETRPLMEVNEASILAWLQNFENGVTLEDALKHFTGSTEAAVVDVLSCMEGD
FLIYKKNNVYKLM
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaatcgactctcaaggaatactttgggttttcgacgtttcgaccgtatcag
aaggagattattgagaagattttggaggggagggattgtttggttgttatggctactggc
agtggcaagtctttgtgctaccaggtgcctccattaatttcaaataagactgcaatagtt
ataagcccactcatttctttgatgcaagatcaggttatggctttgaaacaaagaggtatc
aaagctgagcatctttctactgctcagactaacacaaatgcacaaaagaatgccgaaagt
ggtcaatacgacattctgtatatgactccagaaaaagcatgctttgttcctaacagcttc
tggtcgaggttgcttgccacaggaatttgtctagtggcagttgatgaagcacactgcatc
tcagaatggggccatgattttcgggtggagtacaaacagttatataagctgcgtgatgtt
ttacaaaatgttccatttgttggattgaccgcaacagctacagaaaaggttagaaaagac
ataacagattcacttaagatgaaagatcctcatattgccattggatcatttgatcgtaaa
aacctttattacggtgtgaaatccattaaccgtgggcctttatttgtgaacgagcttgtg
gcacaaatctctaagtatgcaacaaatggcgggtcaactattgtatactgtacgacagtc
aaagatgtccaagagattacggcatcactttgtggggccggaataaaggccggaatgtat
catggtcaaatggctaacaaggcccgtgaacagtcacacaggtcgtttataagggacgag
gtggacgtcatggttgcaactattgcgtttggaatgggtatcgataaaccagacatacgg
cacgtgatccactacgggtgtccgaaaagtttggaatcgtattatcaagaaagtggaaga
tgcggtcgagatggtgttgcttctgattgctggctatacttttcaagagctgatttcggg
aaggctgaattttactgcggagaagcaagctcggcgacccagaagaaagctattatggat
tcatttatggccgctcaacgatattgcatgcagacaacttgcagaagaaaaattttactg
gaatattttggggaaacatttgcttctagtaactgtggaaattgtgataattgcactaat
gctaaggaggaaagtgatatgtctagagaagcgtttctgttgatgggttgcattcaggct
tgtggtggttattggggccttaacttgcctatagacgttcttcgaggttctcgtgccaaa
aagatcaccgaaaaccagtttgacaatctcccgtttcatggactcgggaaggatttttca
gtaaattggtggaagtccctaggttttcaactaatttctttcggttacctggttgagact
gttaaagatacttaccgaactgtaagtgtcggcccagaaggtgcaaaatttctgcggtca
tgtaggcccgatcaccaacctccgttacttttgccgataacaagtgaatcgggaggcaat
gatgacatcaaagctggctcagaacatgatggactatcacaagcagaggtggaactctat
aagattcttctagaagagagaatgaagcttgcaagatctgctggaactgccccatacgcg
gtatgtggtgatttaacgttgaaaaagatagtagcaacacgaccgtctactaaagcaagg
ctggcaaacattgatggtgtcaaccagcaccttgtgacaaagtatggtgatcatcttctt
caaagtattcagcaattatcaaaacaactggacctttcattggacggtgttgcagccata
gaagctaataataacggcaaagcttccacaacaccgaaacaaccaaaagacttgcaaccc
gcaaaatactccgcttggaaaatgtggcaagaggatggtctctctgctgaaaaaatcgct
aactttcctggtagatctgccccgataaaagtaggaacagtccttggatatgttctagat
gcggctcgagaaggatgtatggttgactgggctagattgttcgaagaaatcgggctgacc
cgagagatttttgctcaaatacaagctgccgttttgaaagttggctcaaaagacaaactg
aaacctatcaaagatgaactaccagaagaggtcgagtattttcaaatcaaggcatttttg
acaatgcaagatcttgggttgtcatctgaagctattaatgggaataaaacacaagaatta
tctgaaaagtcaattaatgagaaaagcgaggttgtaatcattgatgagtctccaagaaag
cgaatgaagattgatgtaccagaagaagagactcgccctttaatggaggttaatgaagct
tccattttagcgtggctccagaatttcgagaatggggttacattagaagacgcgttgaaa
cacttcactggatcaacagaagcagcagtggtggatgtgctgagttgtatggagggtgac
ttcttaatctataagaagaacaatgtgtataaacttatgtga
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