Helianthus annuus (common sunflower): 110915520
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Entry
110915520 CDS
T05101
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
han
Helianthus annuus (common sunflower)
Pathway
han03420
Nucleotide excision repair
han04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
han00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110915520
09124 Replication and repair
03420 Nucleotide excision repair
110915520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
han03051
]
110915520
03400 DNA repair and recombination proteins [BR:
han03400
]
110915520
Proteasome [BR:
han03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110915520
DNA repair and recombination proteins [BR:
han03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110915520
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
CUE
TECR_N
UBA_3
Dsc3_N
Ubiquitin_2
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
110915520
NCBI-ProteinID:
XP_022015926
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Position
16:3930820..3937552
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AA seq
376 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPSNTIMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKISEEGFLVVMLSKSKSSGSGGASSTQPSSTTAPASNTTSTPDASSQQQASKTSTSSS
GPTTTSVPATVTAPVNTDTYGQAASNVVENSSIEQTIQHIMDIGGGSWDKETVTRALRAA
YNNPERAIDYLYSGIPDTVEVAVPVTQLPATQPITSSAAPLSGGPNASPLNLFPQEIPSG
AAGGNLGSLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLGLIQENHAEFLQL
INEPVDASEGDLFDQAEADQEMPHAISVTPAEQEAIERLEAMGFDRTLVIEAFLACDRNE
ELAANYLLENAGDYED
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgtaaagactctcaaagggagccacttcgaaattagggttcaaccttca
aacactattatggcggttaagaaaaacattgaagatgtacaaggaaaagataattaccca
tgtgggcaacagttattgattcataatggtaaggtcttaaaagacgaaactacattggct
gataacaaaatctctgaggaaggttttcttgttgtcatgcttagcaagagtaagagttcg
ggctcaggtggagcttcatccactcagccttcatcaacaactgctccagcttctaatact
accagcacacctgatgcttcttcacaacagcaggcttctaaaaccagcacatcttcttct
ggcccaacaacgacaagtgtacctgcaactgtaactgcacctgttaatactgatacatat
ggtcaagctgcttcaaatgtagttgaaaatagtagcattgagcagaccattcaacacata
atggatataggtggtggcagttgggacaaagaaaccgttactcgtgcccttcgagctgct
tacaacaatccagagcgagcaatcgactacttgtattctggtattcccgatacggtagaa
gttgcggttccggtgactcagctccctgcaactcaacctattacttcaagtgccgcacct
ttatctggaggacctaatgcttctccgttaaacttgtttcctcaggaaataccatcaggt
gctgccggaggcaatcttggatcccttgattttcttagaaacaaccagcagttccaagca
ttgcggtctatggtacaatcaaatccgcaaatactacagcctatgcttcaagagctagga
aagcaaaacccgcaacttttaggactaattcaggaaaaccatgctgagtttcttcaacta
atcaatgaacctgttgatgcttctgaaggggatctctttgatcaagcagaagcagaccag
gagatgcctcatgcgatcagtgttactccagcagaacaggaagccattgaacggcttgag
gcaatgggtttcgatagaactcttgttattgaggcctttttagcctgtgatcgtaatgaa
gaactggcagctaattacttactggagaatgctggtgattatgaagactaa
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