Halopseudomonas maritima: HV822_00865
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Entry
HV822_00865 CDS
T08633
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
Organism
harr
Halopseudomonas maritima
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
NagJ_C
Motif
Other DBs
NCBI-ProteinID:
UJJ31767
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Position
184926..188270
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AA seq
1114 aa
AA seq
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MTPALTRLLTLLRSPPGWSALLLILLGLLIWQLGPMVSINGHAIWSSRWSRAATLALLAT
PWVIWRLISYWRKRPAPKPPSPEEEQQQARQIDVHLALHQRWLLAQQQMGHAGLSARERR
QLPWYLLIGPQNAGKSSLICQSELPLVSTTADAPEGDAGPSPAEWHCHRAGALIDCSGHC
LPDAESAAPAAHWQALLNLLRQRRQPALNGVLVTLPVDLLQQDHNLELDNLARRLRQALA
ELRHQLGLDLPVYLLLSKGDLIPGLTELLEQLPANQRQQHFGIHIDDQPNTDPQQQSRAY
AGLLGRLNTQMLNRLHQERDPARRSQLFDLPWQLARLEGPLQRFIEQSFSANRYQPGARL
QGLYFTCAGQHEHDCLMSSPLPARQSGFITELLEQIILGNPQRVCLDQQRRQHQRRRQRI
GLGLAAAGLAACTLGWGWAYHQQSERLSQLAQLAEHFLPTTPTIEAHSRITALLQQLDTR
YAATLVQPKVTSSALGQNLTLEQAPAVQPQVQRHYQQALRDYLQPLISRQLEARLRSAHA
DRQQLIGHLRAYLMLSQSERLDADYLQQWMREEWRHRYPDQADVQQHLNQHLARLLALPW
QSAAANHELISAVREQLQQESLAQLTYRLLREQARALPTYRLDSQLGADHQLLASRPVEI
PGFYSKPGYQTLFQQRGPALIERLLEDNWVLGNRSRLTPSERRQLLIEVEALYFQDYTDQ
WVRALAALRMAPLRSGRAVTDLAALGASSAPHLQLLLQLREHTRLIDPALDHSAPASPAK
QALQQQFSELHALLDDTGAPSPALRQSQQALAQLQLQVAQLYNSGDSGQQAFEMARKRMQ
HQADAISATRDAAGVLPAPLDSWIGQVASDAWGQVLADAGRYLNQRYRADLYSVYRSALA
QRYPFSADSNRDVELNDFRSFFQHEGTVERFIGSYLQPFVIHSNGRYRLRSLDGRNLPLS
AALLTQLGRAQAIRDGFFADDPFEPGVQFRLEPYALDASLGRSSFHYGPQQLEYRHGPIV
ATAFRWPAAEGSERISLTLEDLGGRRMRLQQEAGAWSLFRLLDRVDIERQEERDALLLRA
SIGGMRAQYLLHSQRAPNPFDPELLRNFALPAQL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgcgctgacccgcttacttaccctactgcgctcaccacccggctggtccgcg
ctgttgctgatactgctcggcttgctgatctggcagctgggccccatggtatccatcaac
ggccacgctatctggagcagccgctggagccgcgcggcgaccctggccttactggccacg
ccatgggtgatatggcgcctgatcagctactggcgcaaacgcccggcccccaagccaccc
agcccggaagaagagcaacagcaggcccgtcagatcgacgtgcacctggccctgcatcag
cgctggctgctggcccagcagcaaatgggccacgccggactcagtgcccgcgagcgtcga
cagttgccctggtacttgttgattggcccgcaaaacgccggaaaaagcagtctgatttgc
cagtcggaactgcccctggtgagcaccaccgccgatgcaccggaaggtgacgccggccca
agtccggctgaatggcactgccaccgagcaggtgcgctgattgactgcagtggccactgc
ctgcccgacgccgagtccgccgcaccagcagcgcactggcaggcactgctcaatctgctg
cgccagcgccgccaaccggcactgaacggcgtgctggtcaccctaccagtcgacctgctg
caacaggaccacaaccttgaattggacaatctggcacgccgcctgcgtcaggcactggca
gagctgcgccatcagcttggtctggacctgccggtgtatctgctgctgagcaagggagac
ctgatcccgggcctcaccgaactgctagagcaattgccggccaatcaacgtcagcagcac
tttggtatccatatcgatgaccaacccaacaccgatccgcaacagcaaagccgtgcctat
gccggcctgctcggccgcctgaatactcagatgctgaaccgcctgcatcaggagcgcgac
ccggcccgtcgcagccaactgtttgacctaccctggcagctcgctcgcctggaaggtcca
ctgcaacgctttatcgagcagagcttcagcgccaaccgctaccagcccggtgcccgcctg
caaggcctgtacttcacctgcgcaggtcaacacgagcacgactgtctgatgtcctcacca
ctgccggccagacagtccgggtttatcacggagctgttggagcagatcatcctcggtaac
ccccagcgcgtatgcctcgaccagcagcgccgacaacatcagcggcgccgtcagcgcatc
ggcctgggcctggctgccgccggactggcagcctgcacccttggctggggctgggcctat
caccagcagagcgagcgcctcagccagctggcgcagctggctgagcacttcctgcctact
acgcctaccattgaagcgcatagccgcatcacagcgctgctgcagcaattggacacccgc
tacgcggccaccctggtgcaacccaaggtaaccagtagcgcgcttggccagaacctgacg
ttggagcaggctccagcagtacaaccacaggtgcaacgccactatcagcaagcgctacgc
gattacctgcaacctctgatcagccgccagctggaggcgcggttgcgcagcgcacacgcc
gatcgtcaacagctgattggccacctgcgcgcctacctgatgctcagccagagcgagcgc
ctggacgctgactacctgcaacagtggatgcgcgaagagtggcgccaccgataccccgac
caagccgacgtccaacaacacctgaaccaacaccttgccaggctgctggcactgccctgg
cagtcggcagcagcaaaccacgagctaatcagcgcggtgcgcgaacaactgcagcaagag
tctctggcccagctgacctatcgtctgctgcgcgaacaggcccgcgccctgcccacctac
cgcctcgacagccagttgggtgccgatcaccagctgttggccagccgaccggtggagatt
cccggtttctatagcaagccgggctatcagacgctgttccaacaacgggggccggcgtta
atcgagcgcctgctggaggacaactgggtgcttggcaatcgcagccgcctgacgcccagt
gagcggcggcagctgctgattgaagtggaagcgctttactttcaggattacaccgatcaa
tgggtacgcgccctggccgcactgcgcatggcaccgctacgcagcggtcgtgccgtcacc
gatctggccgctctgggcgccagcagcgcgccacacctgcaactgctgctgcaattgcgc
gagcacacccggctgattgacccggcactcgaccattcagcgcctgccagcccggccaaa
caggcgttgcagcaacaattctccgagttgcacgcactgctggatgacaccggcgcgccc
agtccagcgctgcgccagagccagcaggcgctagcgcagctgcagctgcaggtcgcccag
ctatataacagcggcgacagcggccaacaggcctttgaaatggcgcgcaaacgcatgcag
catcaggctgatgccatcagcgccacccgtgacgccgccggcgtgctgccggcgccactc
gacagctggatcggtcaggtggcgtccgacgcctggggacaggtgttggccgacgcagga
cgctatctcaatcagcgctaccgcgcagacctctacagcgtctaccgcagcgccctcgcc
cagcgttatccattcagcgctgacagcaaccgcgacgttgaactgaatgacttccgcagt
ttcttccagcatgagggtacggtcgagcgttttatcggaagttacctgcaacccttcgtc
atccacagcaatggacgctaccgcctgcgttcgctggacggccgcaatctgccgctctct
gcggctctactgacgcaactgggccgcgctcaggcgatccgtgacggcttctttgccgac
gaccccttcgagcccggcgtacagtttcgccttgagccctatgccctggatgccagtctc
ggccgatccagctttcattatggcccgcagcaactggagtatcgccatggcccgattgtc
gccaccgctttccgctggcctgcggcagagggcagcgagcgcatcagcctgaccctggaa
gacctcggcggccgccgcatgcgcctgcagcaggaggccggcgcctggtctctattccgt
ctgctagatcgggtggatatcgaacgccaggaagagcgcgatgcactgctactgcgcgcc
agcatcggcggcatgcgcgctcagtacctgctgcacagccagcgagcgcccaatccgttt
gaccctgaactgctacgtaacttcgccctgccagcgcagctatga
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