KEGG   Halopseudomonas maritima: HV822_16440
Entry
HV822_16440       CDS       T08633                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
harr  Halopseudomonas maritima
Brite
KEGG Orthology (KO) [BR:harr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:harr03000]
    HV822_16440
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:harr02044]
    HV822_16440
Transcription factors [BR:harr03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    HV822_16440
Secretion system [BR:harr02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   HV822_16440
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 GAF GAF_2 HTH_30 GAF_3 HTH_50 AAA_2 AAA_16 AAA Zeta_toxin TIP49
Other DBs
NCBI-ProteinID: UJJ31318
LinkDB
Position
complement(3561703..3563271)
AA seq 522 aa
MFTWKTTEASGVTLLESLSLPDSTHPLTCAAPLLACLAQLASEPQQLQQQLLACASQLTQ
CPLAQLYLLDKTHTRLHLSSQWFDGAPLHCNIGEAPTNWFEQQLLQYCLTQNRSLNLRDL
DHSLYATPFLPNSAKPWHSLLCVPLQDTNQQLAGLLLLAKQQGDIADALTEPVRHLGGIG
LGRLRLLQQQQDLQQCQHNEPAPPNSQPEHGSFGLIGQSPAMQQVYRLISKVLHNPVTVL
IGGETGTGKELVARAIHDYGSRRSKPFVAQNCSALPEQLLESELFGYRKGAFTGAMQDRT
GLFDAADGGTLFLDEIGDMPLALQAKLLRVLQEGEIRPLGSTQSHRVDVRILAATHQRLH
EQVQRGLFREDLYYRLGHFPINLPPLRDRGSDIRQLALQFAVDTCTFLQRSPCHWSDSAL
AYLASHRFPGNVRELKGLIARALLLCDGNLLLPEHLQLPDTPQHAHRLGLREQLEALERN
LLIEGLQLHGGNQTLTAQALGLPRRTLLYRMQRLGLTSASTK
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgttcacttggaagacgacggaggcatccggtgtgaccttgcttgaatcgcttagtctg
cccgacagcacgcacccgctcacctgcgcagcaccgttgctggcctgtctggcccagctg
gccagcgagccgcagcagctgcagcaacagctgctggcctgcgccagccagctgacccaa
tgcccgctggcgcagctctacctgctggacaagacgcatacccggctgcacctgagcagc
cagtggtttgacggcgcccccctacactgcaacataggtgaggcacccaccaattggttc
gagcaacagctgctacagtactgcctgacccagaatcgcagcctgaatctgcgcgacctt
gaccacagcctgtacgccacgcccttcctgcccaacagcgccaagccctggcacagcctg
ctgtgcgtgccgctacaagataccaatcagcagctagccgggcttttgctgctggcaaaa
cagcaaggcgatattgctgatgctctgactgaaccggtgcgccacctgggcggtattggc
ctgggccgcctgcggctattgcaacaacagcaagacctccagcaatgccagcacaacgag
ccggcgccacccaatagccaaccggagcacggcagcttcggcctgattggtcagagcccc
gccatgcagcaggtttaccgtttgatcagcaaggtgttacacaacccggtgaccgttctg
atcggcggcgaaaccggcaccggcaaggagctggtagcccgcgccattcatgactatggc
tcgcgccgcagcaagccctttgttgcacaaaactgcagcgcgctgcctgagcaactgctg
gaaagcgagctgttcggctaccgcaaaggcgcctttaccggcgccatgcaagatcgcacc
gggctatttgacgcagccgacggcggcaccctgtttcttgatgaaatcggcgatatgccg
ctggctctgcaggccaaattgctacgcgtattgcaggaaggcgagattcgcccgttgggc
agtacccagagccaccgggtagacgtgcgcatcctcgcagccacccatcagcgcctgcat
gagcaagtgcagcgcggcctgttccgcgaagacctttattaccgactagggcactttccc
atcaacttgccaccactgcgtgaccgaggcagcgacatccgccagctggcgctgcaattt
gccgtcgatacctgtaccttcctccagcgcagtccctgtcattggagtgacagtgccctt
gcctatctggccagtcatcgtttcccaggcaatgtccgcgagctaaaaggcctgattgcc
cgcgccttgctgctgtgtgacggcaacctgctactgcctgaacacctgcagctgccggac
accccgcagcacgcacaccgcctgggcctgcgcgaacagctggaagcgctggagcgcaac
ttgctgatcgaagggctgcagctgcacggcggcaatcagacattgaccgcccaagccctg
gggctaccacgtcgtacattgctttaccgcatgcagcgcctgggtttgacatcagccagc
acaaagtag

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