Halomonas binhaiensis: E4T21_00945
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Entry
E4T21_00945 CDS
T08791
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hbh
Halomonas binhaiensis
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hbh03000
]
E4T21_00945
Transcription factors [BR:
hbh03000
]
Prokaryotic type
Helix-turn-helix
Other families
E4T21_00945
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_Tnp_ISL3
HTH_23
Mg_chelatase
HTH_50
AAA
AAA_16
HTH_22
HTH_17
HTH_AsnC-type
AAA_2
HTH_30
HTH_28
TrmB
HTH_29
HTH_20
HTH_7
HTH_11
ISP1_C
AAA_22
TetR_N
HTH_IclR
LZ_Tnp_IS481
AAA_7
nSTAND3
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QEM83845
UniProt:
A0A5C1NNR3
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Position
complement(193469..195454)
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AA seq
661 aa
AA seq
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MALRIEQRQHISNLIRLSEGHDIGLGTYREVIHRSWQRCVGEYQLDPGCPRPVRVLTQQA
LRDHQEPIDELLHVARAGVDQLYGQIAQLGYVLLLTDPRGITVDFRGQHDQALRQAGLYL
GADWNERYAGTCAVGTCLHDGQAITCHHAEHFDATHISLTCTAAPITDPQGQMMAVLDIS
ALQSPRSQDSQTFALALVNLYSRMIEDAYFLHRYRNCLILRFDTTRELVHFNGRGLIAME
EDGRIIAANGNGRALIEKHLLRWPSWSDDSSLKATQLFDAEIGDLLSILTSHEDQIRAFR
VRANEITCFVTLVEPRGRHLASHEQKESPDPVPALDRLASDDPMMRRVIKLSRRLRNEDV
SVLITGETGTGKEVLARALHDSGKRANGPFVAVNCAAIPESLIESELFGYLPGAFTGGQR
KGMRGLIQQAHGGTLFLDEIGDMPLSLQTRLLRVLAEREVMPLGADTPVKVDIRVITATH
RDMSELIRSGHFREDLYYRLNGAQLKLPALRERVDRQYVIRGVYDALLKERDQGIHLRAD
AMSALLTYDWPGNIRQLKNALSFALATAEGEEITLHDLPEECQCNRLPVTLSTRASTSTT
PYASTMGQPKAQADGRDLLELLQRSAWNVSHVARQLGVSRPTIYRRMRRHGLVPPNQRQM
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcgcatcgagcaacgccagcatatcagtaacctgatccgtcttagtgaaggc
cacgacatcggccttggcacctaccgcgaggtgattcatcgctcatggcaacgctgtgtc
ggcgagtatcaactggatcctggctgccctcgcccggttcgggtgctgacccagcaggcc
ctgcgtgatcaccaggaacccatagatgagctgttgcacgtggcccgggccggtgtcgac
cagctctatggccagatcgctcaattgggttatgtgctgctgttgactgacccgcgcggc
atcacggtggacttccggggacagcatgatcaggcgctacgccaggctggcctctatctg
ggcgcagactggaacgaacgttacgccggcacttgtgcggtagggacttgcctgcatgat
gggcaggccattacctgccaccacgctgaacatttcgatgcaacgcatatcagcctgacc
tgcacggcagcaccgatcaccgatccccagggacagatgatggccgtgctggatatttcc
gccctgcagtcgcctcgttcccaggacagccagacctttgctctggcgttggtgaacctc
tattcacggatgatcgaggatgcctatttcctgcaccgctatcgcaactgcctgattctg
cgtttcgacacgacacgggaactggtgcacttcaatggccgcggattgatcgccatggaa
gaggacggacgcatcatcgccgccaatggcaatggccgtgccctgatcgaaaaacacctg
ctgcgctggccatcctggtctgacgacagcagcctcaaggccactcagctattcgatgcc
gagatcggggacctgctgagtatcctgacttcccacgaagaccagatccgggccttccgt
gtgcgggccaacgagataacctgctttgtcaccctggtcgaaccacgtggtcgccacctg
gcttcgcatgagcagaaggagtctcccgaccccgttcccgcgctggatcgcctggcctcg
gatgatccgatgatgcgccgcgtgatcaagctatcgcgccgcctgcgtaatgaagacgtg
agtgttttgatcaccggggagacaggcacgggcaaggaggtgctggcccgggcactgcac
gacagcggcaagcgcgccaatggccccttcgtggcagtgaattgtgccgccattccggaa
tccctgatcgagagcgaacttttcggttacctgccaggagcctttacgggaggacagcgc
aagggaatgcgcggcctgatccagcaggcccacggaggcacgctgtttctcgatgaaatc
ggcgatatgccactctcgctgcagactcgcctgctgcgagtcctggccgaacgggaagtg
atgccactgggtgccgacaccccagtgaaggtcgacatccgagtcattactgcgacgcat
cgggacatgagcgaactgatccgttcaggtcattttcgcgaagatctctactaccggctc
aacggcgcccaactgaagttgccggcgctgcgcgagcgggtcgatcgccaatatgtgatt
cgtggtgtctacgacgccttgctgaaagaacgcgatcaaggcattcatctacgtgccgat
gccatgagcgcactgctgacctatgactggcctggcaatatccgccaactcaagaatgcc
ctgtccttcgcgttggccacggcagaaggcgaggaaatcaccttgcatgacttgccggaa
gagtgtcagtgcaaccgtctgcctgtcacgctatcgacaagagcttccaccagcaccact
ccctatgcgtctaccatgggtcagccaaaggcccaggcagatggtcgcgaccttctggaa
ctcctgcagcgctcggcctggaatgtcagtcatgtcgcacgccaattgggcgtctcccgg
cccaccatataccgacgcatgcgccgccatgggctggttccccctaaccagcgccagatg
acatga
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