Helicobacter bilis: XJ32_02335
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Entry
XJ32_02335 CDS
T04788
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hbl
Helicobacter bilis
Pathway
hbl03030
DNA replication
hbl03430
Mismatch repair
hbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XJ32_02335
03430 Mismatch repair
XJ32_02335
03440 Homologous recombination
XJ32_02335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbl03032
]
XJ32_02335
03400 DNA repair and recombination proteins [BR:
hbl03400
]
XJ32_02335
Enzymes [BR:
hbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XJ32_02335
DNA replication proteins [BR:
hbl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XJ32_02335
DNA repair and recombination proteins [BR:
hbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XJ32_02335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AQQ59138
UniProt:
A0A1Q2LFE8
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All DBs
Position
514631..515437
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AA seq
268 aa
AA seq
DB search
MALQYFGHYFNLLDQMPLSLESFHTQLSNVLPEYGTLECETLLEVMIGLHAPLYRVSDIE
SSDYIIDTTIKNINLNEAKLCFVDIETTSASVKNGQIIEIGAIIAQNGEILDTFDTLVYS
PFVPEDIIDLTGIDSYMLEDAPRLEQVLKQFRAFLGDSVFVAHNVSFDYNFIAESLHEYD
MPPLFNPRLCTLDLSRRTIVSKKYALAYLNDMLGINTAQAHRAYADALTAFRLYEICMQS
LPKEVKTLQELIAFSKGKIAYPQRVAGK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcagtattttggacactattttaatctgcttgatcaaatgcccctaagcctt
gagagttttcacacacaattaagcaatgtcttacctgaatatggcacgcttgaatgcgaa
acgctgcttgaagtaatgattggcttacatgcaccactttatagagtgagtgatatagaa
tctagcgattatattattgacacaacaataaaaaatattaatctcaatgaagcaaaacta
tgctttgtggatatagagacgacatcggcaagtgtgaaaaatgggcaaatcattgaaatc
ggggcaataatcgcacaaaatggagagatactagacacttttgatacgcttgtgtatagc
ccatttgtgccagaggatattattgatctcacaggcatagattcctatatgctagaagat
gcaccacgacttgagcaggtattaaagcagtttcgcgcatttttaggcgatagcgtattt
gtcgcacataatgtttcatttgattacaactttatcgcagaaagtctgcatgaatatgat
atgccaccactctttaatcccagattatgcacgctagaccttagtcgtaggactatcgta
tcaaaaaaatacgcattagcctatctcaacgatatgttaggtataaacacagcacaagcc
catagggcttatgctgacgcactaaccgcttttagactatatgaaatatgtatgcaatca
ctcccaaaagaagtaaaaaccctgcaggaactcatcgccttttcaaaaggaaagattgca
tatccacaaagagttgcggggaaatag
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