KEGG   Halogeometricum borinquense: Hbor_39470
Entry
Hbor_39470        CDS       T01359                                 
Name
(GenBank) DNA polymerase sliding clamp subunit
  KO
K04802  proliferating cell nuclear antigen
Organism
hbo  Halogeometricum borinquense
Pathway
hbo03030  DNA replication
hbo03410  Base excision repair
hbo03420  Nucleotide excision repair
hbo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hbo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Hbor_39470
   03410 Base excision repair
    Hbor_39470
   03420 Nucleotide excision repair
    Hbor_39470
   03430 Mismatch repair
    Hbor_39470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hbo03032]
    Hbor_39470
   03400 DNA repair and recombination proteins [BR:hbo03400]
    Hbor_39470
DNA replication proteins [BR:hbo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Hbor_39470
DNA repair and recombination proteins [BR:hbo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Hbor_39470
   MMR (mismatch excision repair)
    Other MMR factors
     Hbor_39470
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Hbor_39470
SSDB
Motif
Pfam: PCNA_N PCNA_C Hus1
Other DBs
NCBI-ProteinID: ADQ69261
UniProt: E4NW41
LinkDB
Position
pHBOR03:complement(154541..155281)
AA seq 246 aa
MNVIVEYSRLQTFLNVAMAVVHECRLRCTEDHLRITATDPAQVAQVETTLASDGCESFET
DGEVLGINLEKLDDALGFASTGDLVLLELNTETRKLEIEYDGFGYDLGLIDPESIRREPD
IAEVDFPARIRVYGHRLERGIKGCDLASDHTRFEGDAESGEFRATAEGDTDDVSIRMDSE
DLQTDIPEAVSSLFSIGYLTELVDPIENDTEVVVKVGDEFPLTWFYELSEGNVAVTNFLA
PRIART
NT seq 741 nt   +upstreamnt  +downstreamnt
atgaacgttatcgtcgagtactctcgtctgcagacgttcctcaacgtcgctatggcggtt
gtccacgagtgccggctccgctgtactgaggaccatcttcgcatcactgccaccgatcca
gcccaggttgcgcaggttgagacgacgctcgcctcggacggttgcgagtcgtttgagacc
gacggagaggttctcggaatcaacctcgaaaagttggatgatgcactcggctttgcgagt
acgggtgatctcgtcttactcgaactcaacacagagactcgaaaactcgaaatcgagtac
gacggattcggctacgacctcgggctgatcgaccccgagagtatccggcgagagccggac
atcgcggaagttgactttccagcacgcatccgtgtctacggtcatcgtctcgaacgcgga
atcaaaggatgtgatctcgcaagcgaccacacccgattcgagggtgatgccgagagcggt
gagttccgcgcaacagcagaaggggatactgacgatgtctcaattcgtatggactccgag
gatttgcagacggacatccccgaagccgtgtcatcgctgttctctatcgggtacctgacc
gaactcgtcgatcccattgaaaacgataccgaggtggtcgtcaaggtcggtgacgaattc
ccgctcacatggttctacgaactgagtgaagggaacgttgcggtgacaaacttccttgcg
cccagaatcgcgagaacgtga

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