Helicobacter pylori PeCan18: HPPC18_03085
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Entry
HPPC18_03085 CDS
T02036
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hca
Helicobacter pylori PeCan18
Pathway
hca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPPC18_03085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hca03019
]
HPPC18_03085
Enzymes [BR:
hca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HPPC18_03085
Messenger RNA biogenesis [BR:
hca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPPC18_03085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Fungal_KA1
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AFI02386
UniProt:
I0EHG7
LinkDB
All DBs
Position
647473..648681
Genome browser
AA seq
402 aa
AA seq
DB search
MFELEKELKELFDIYEKSPYELYLVGGCVRDCLMGITPKDYDLTSNALVSESKELLLKRH
FRVLETGIKHGTITALKNHQSYEITTFRMEKGHIKHRKPKELVFSARLMDDLKRRDFSMN
AIAYSPTKGLIDPFNGRSAIENQMIECVGEARLRFFEDALRILRALRFSATLGFKIAPST
KEAVFACKDLLKHLSKERLQSELNKLLMGKNAYEVAKEYQEILELVIQEKIENLGFLKNA
PFNLELRLLGFFKHQKSLENLRYPKKTCVLFTQAKECHKAFLNIHNKTELKFLLKNYDLE
PFNLALEFYALKNPKRALKIKGLLKEILNANEPFKKEHLALKGGILQNLGYRHQQIGEIL
NACLNSVIENPKNNALEWLIEWVKGHYLPNDAINLSQIRQKN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagttagaaaaagaattaaaagaattgtttgatatttatgaaaaatctccttat
gagctttacttggtaggggggtgcgtgcgcgattgtttgatgggcattacccccaaagat
tacgatttaacctcaaacgctttggtgagtgagagtaaagagcttcttttaaagcgccat
tttagggtgctagaaaccggtatcaaacatggcacgatcacggctcttaaaaaccatcaa
agctatgaaatcacaacttttagaatggaaaaggggcatatcaaacaccgaaagcctaaa
gaattggtttttagcgcgcgtttaatggacgatttaaagcggcgcgattttagcatgaat
gcgatcgcttatagccctacaaaagggctgattgatccttttaatgggcgaagcgcgatt
gaaaatcagatgattgaatgcgtgggggaagcgcgattgaggttttttgaagacgcttta
aggattttaagagcgctacgatttagcgcgactttaggctttaagatagcgccaagcact
aaagaagcggtttttgcgtgtaaggatttgttaaaacacctctccaaagaacgcttacaa
agtgaattgaataagcttcttatggggaaaaacgcctatgaagtggctaaagaatatcaa
gaaattttagagttggttattcaagaaaaaatagaaaatttagggtttttaaaaaacgcg
cctttcaatctggaattaagattgttagggttttttaaacatcaaaaaagtttagaaaat
ctacgataccctaaaaaaacttgtgttttatttactcaagctaaagaatgccacaaagct
tttttaaatattcataacaaaacagagttaaaatttttattgaaaaactacgatttagag
ccttttaatttggctttagaattttatgcgctcaaaaaccccaaacgcgctttaaaaatt
aaaggcttattaaaagaaatactcaacgctaacgagccttttaaaaaagaacacctagcc
cttaagggtgggattcttcaaaatttaggctaccgacaccaacaaatcggcgaaatttta
aacgcatgcttaaattcagtcattgaaaatcctaaaaacaacgctttagaatggctgatt
gagtgggttaagggtcattatttacctaatgatgctataaatctttcgcaaataaggcag
aaaaattaa
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