Helicobacter pylori PeCan18: HPPC18_07345
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Entry
HPPC18_07345 CDS
T02036
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hca
Helicobacter pylori PeCan18
Brite
KEGG Orthology (KO) [BR:
hca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hca03016
]
HPPC18_07345 (trmE)
Transfer RNA biogenesis [BR:
hca03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPPC18_07345 (trmE)
Prokaryotic type
Methyltransferases
HPPC18_07345 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
RsgA_GTPase
GTP_EFTU
ABC_tran
Ras
cobW
Arf
MMR_HSR1_Xtn
AAA_29
ATP_bind_1
ATP-synt_ab_N
FtsK_SpoIIIE
Roc
iSTAND
Motif
Other DBs
NCBI-ProteinID:
AFI03193
UniProt:
I0EJS4
LinkDB
All DBs
Position
complement(1534298..1535650)
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AA seq
450 aa
AA seq
DB search
MNDTIAAIATPSGKGAISVIKISGNNALNILKQLTQKQDFTPRYAYVRDIFSNGVLLDKA
LVIYFKAPYSFTGEDVCEIQCHGNPLLAQNILQACLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARGNLLKLLASSEVLIDYSEEDIPS
DFLDEVSLNLEKQIASFKDLLDFSNTQKQKNKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESADKIERLGIEKSLKSLENCDIILGVF
DLSKPLEKEDFNLIDTLNRAKKPCIVVLNKNDLAPKLELEILKSHLKIPHSLLETNTLNS
KACLKDLSQKISEFFPKLDTQNKLLLTSLAQTTALENAIIELQNAKSHLDTLELFSYHIL
SAIENLNLLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccatcgccgctatcgctaccccttcaggcaagggagcgattagcgttatt
aaaatcagcggcaataacgctctaaacatcctcaaacaactcacccaaaaacaagacttc
acccccagatatgcttatgtgcgcgatattttttctaatggtgttttattggacaaagcg
ttagtgatttatttcaaagccccctatagtttcaccggcgaagatgtgtgcgaaatccaa
tgccatggaaaccctcttttagcgcaaaatatcttacaagcttgcttgaatttaggggct
aggcttgctaaagcgggggaatttagcaaaaaagcctttttaaaccataaaatggatttg
agcgagattgaagcgagcgttcagctcatcctttgtgaggatgaaagcgttttaaacgct
ctagccaggcagcttaagggcgagttaaaaatttttattgaagaagctagaggcaatctt
ttaaagcttttggcgagctcagaagttttgattgattatagcgaagaagacattcctagc
gattttttagatgaagtatctcttaatttagaaaaacaaatcgcctcttttaaagactta
ttggatttttctaacacgcaaaaacaaaaaaacaaagggcatgccttaagcattgttggc
aaacccaatgctggcaaaagctctttattaaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacaccatagaagaagtcattgaattgcaaggg
cataaggtgcgcttgattgatacggctggcattagagagagcgcggataaaatagagcga
ttagggattgaaaaaagccttaaaagtttagaaaattgcgacattattttaggcgtgttt
gatctttctaaacccctagaaaaagaagattttaaccttattgacaccctcaatcgcgct
aaaaagccttgcattgttgttttgaataaaaacgatttagcacccaaactggagcttgaa
atcttaaaatcccatcttaaaatccctcattctttactagaaaccaacaccctaaattcc
aaggcttgtttgaaagatttgagccaaaaaatcagtgagtttttccccaaactagacact
caaaacaagctcttgctcacttccctagcccaaacaaccgccctagaaaacgccattatt
gaattgcaaaacgctaaaagccatttagacactttagagcttttttcttatcatatttta
agcgcgatagaaaacttgaacttgctcacccgcccttatgaaaccagccagatgcttgat
agcatgttcagcgaattttgcttaggcaaatga
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