Helicobacter cetorum MIT 00-7128: HCW_04180
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Entry
HCW_04180 CDS
T02032
Name
(GenBank) pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hce
Helicobacter cetorum MIT 00-7128
Brite
KEGG Orthology (KO) [BR:
hce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hce03009
]
HCW_04180
Enzymes [BR:
hce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HCW_04180
Ribosome biogenesis [BR:
hce03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HCW_04180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AFI04105
UniProt:
I0EMD6
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All DBs
Position
894526..895401
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AA seq
291 aa
AA seq
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MPFIEEEFKISEPKKALFVVRDILNCSLKEAQRHIDKQRLRVDNKVVKKSQIIQGMVSLT
YFKPVNNTQELVFETKDFGVFNKSAQVYTHPKGYFYHKSLLDCIQASFGRGAHPAHRLDY
ETSGLVLVGKNLQHTKALKALFMQQKVKKTYLALVHGKLIQSLRIDEPILVPQTIQEDLR
IRSCISPLGKLAITLVEPLSYNALLDISLIRVTPLTGRTHQIRLHLSYVGHRIIGEGLYG
VSDENAREYLKLKRENQAPLLMLHAISLEFNFKNANYKIVSQIPKRFLSFL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgccttttatagaagaagaatttaagattagtgagcccaagaaagcactttttgtggtg
cgtgatattttaaactgctctttaaaagaggcgcaacgccatattgacaagcaacgatta
agggttgataataaggttgttaaaaaatctcaaatcattcaaggcatggttagcttaact
tattttaagcctgtaaataatactcaagagcttgtttttgagactaaggattttggcgtg
tttaataaaagcgctcaagtctatacccaccctaagggctatttttaccataagagtttg
ctagattgcattcaagcaagctttggtaggggggcgcaccctgctcatagactagattat
gaaacaagtggtttggtattagtaggtaagaatttgcaacataccaaagccttaaaagcg
ctttttatgcaacaaaaagttaaaaaaacttatttagctttagtgcatggcaagcttata
caatcattgcgtattgatgagcctatcttagtgcctcaaactatccaagaggatttacgc
attcgctcttgtatctctcctttaggcaagcttgcaatcacgcttgttgagccactaagc
tataacgctttactagatattagcctaattagagtaaccccacttaccgggcgcacgcac
caaatccgcttgcatttaagctatgtggggcataggattataggcgaggggctttatggg
gtgagtgatgaaaatgcgagagagtatttaaaattaaagcgtgaaaatcaagcgccctta
cttatgctccatgcaattagcttggagtttaattttaaaaatgcaaattataaaatcgtt
tcacaaattcctaagcgttttttatcttttttatga
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