Hemicordylus capensis (graceful crag lizard): 128352171
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Entry
128352171 CDS
T08891
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
hcg
Hemicordylus capensis (graceful crag lizard)
Pathway
hcg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128352171 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcg03019
]
128352171 (EXOSC1)
Messenger RNA biogenesis [BR:
hcg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128352171 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
128352171 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
128352171
NCBI-ProteinID:
XP_053168467
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Position
3:complement(287319154..287324346)
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AA seq
194 aa
AA seq
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MVPARYCVPGEKLCSLEEGTSGSGTYTRHGSIFASLAGCLVKKSENGMLPVVSVMRDVES
QLLPDVGATVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDIRATEKDKVELYKS
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTHAKE
LRKVARVQPQFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggtacccgctcggtactgcgtccctggtgagaaactctgcagtctagaggaaggaacc
tctggcagtggtacctacacccgtcatggttctatctttgcctctttggctggttgcctt
gtgaagaaaagtgagaatggcatgttaccagtggtctctgtaatgagagatgtggagtct
cagcttcttccagatgtgggtgctactgtaacatgcaaggtttgcagcattaactctcgt
tttgccaaggtgcacatcttgtatgtcggttctacaccactgaaatctccattccgtgga
acaatacggagagaagatatccgagctacagagaaagacaaggtagaactttataagagt
ttccggccaggagatattgttttggccaaagttatctctctgggggatgcacagtccaac
tacttgctgaccacagcagaaaatgagctgggagtagtggtggctcatagtgaagcagga
gtacagatggtgccaatcagctggtgtgaaatgcagtgtcccagtacacatgccaaggaa
ctgcgcaaggtagcccgggtccagccccagttcctgcagacatag
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