Helicobacter cholecystus: NCTC13205_00051
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Entry
NCTC13205_00051 CDS
T06600
Symbol
thdF
Name
(GenBank) thiophene and furan oxidation protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hcl
Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcl03016
]
NCTC13205_00051 (thdF)
Transfer RNA biogenesis [BR:
hcl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NCTC13205_00051 (thdF)
Prokaryotic type
Methyltransferases
NCTC13205_00051 (thdF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
GTP_EFTU
AIG1
RsgA_GTPase
Roc
Ras
AAA_18
AAA_15
Motif
Other DBs
NCBI-ProteinID:
VEJ23928
UniProt:
A0A3D8IVY9
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All DBs
Position
1:49167..50516
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AA seq
449 aa
AA seq
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MSLEQNKSTIAAISTPLGGGAVGIVRLSGDKSLEIVKTLSKNSAFIPRYATLTTLYDREG
EILDEVIVIYFKAPYSYTREDVVEIQCHGGNMMVRRILDEVLYLGVRLAQSGEFTKRAFL
NGRLDLSQAQAVAKLIEAKSIQAQKTLLKQLKGELSVFVEQSRESLYEALAYSEVMIDYS
EEDIPEDTLDLLNQKIDTLYTRLEKILFHSRSRVGIFEGFSLCIVGKPNVGKSSLLNALL
LYDRAIISNIAGTTRDTIEEMLNIGSTQVRLIDTAGIRESDDEIENIGIAKSKEAMEKSD
IILVVFDGSKELDDEDEKIIDLLKTQDKKRIISIFNKNDLPQKVRNSLPYPSFCLSAQNK
EIDELVSYLQGILQESESDEILLCASNQIQSIEQTLDFLSEAKEMLHKGCLELFSYNIRD
AIESLGKITRPYESTDLLDKMFSEFCLGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagaacaaaataagtctacaattgctgctattagcacacctttaggtggaggg
gcagtagggattgtgcgtttaagtggcgataaaagtcttgagattgttaaaaccttgagt
aaaaactctgctttcattccacgctatgccacgctcacaacactttatgatagagagggt
gaaattcttgatgaagtgattgtgatttattttaaagctccctatagctataccagagaa
gatgttgttgaaatccaatgccatgggggaaatatgatggtcagacgaattttggatgaa
gttttgtatttgggggtgagattggctcagagtggagaatttactaaacgagcctttctc
aatggcagacttgatctctcacaagctcaagctgtggcaaaactcattgaggctaaaagt
attcaagcccaaaaaactcttcttaaacaactcaagggtgaattaagcgtctttgttgag
caaagtagagaaagtctttatgaggcattagcctatagtgaggtgatgattgattatagt
gaagaggatattccagaagacaccctagatctcctcaatcaaaagattgatacgctttat
acaagacttgaaaaaatcttatttcattcacgctctagagtgggaatttttgagggattt
tctttgtgtattgtaggaaagcccaatgttggaaaaagctctttactcaatgctttgctt
ctttatgatcgtgccattattagcaatattgcaggaactacaagagatacgattgaggag
atgttaaatattggaagcactcaagtgagattgattgatactgctgggattagagagagt
gacgatgaaattgaaaatatagggattgcaaagagtaaggaggcaatggaaaaaagcgat
attatacttgttgtttttgatggttcaaaagaacttgatgatgaggatgagaaaatcatt
gatttgctcaaaactcaagataaaaaaaggattattagcatttttaataagaatgatttg
cctcaaaaagttagaaattctttaccctatccctccttttgcctctctgcacaaaataag
gagattgatgaacttgtgagctatttgcaaggtattttgcaagagagtgaaagcgatgaa
atactcctttgtgcaagcaatcagattcagagcattgagcaaactttagactttttgagt
gaggcaaaagaaatgcttcacaagggttgtttggagctgttctcttataatattagagat
gctattgaaagtcttggaaaaatcactaggccctatgaaagcacagatttgctcgataag
atgttcagtgagttttgtttggggaaataa
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