Helicobacter cholecystus: NCTC13205_00690
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Entry
NCTC13205_00690 CDS
T06600
Symbol
sfhB
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
hcl
Helicobacter cholecystus
Brite
KEGG Orthology (KO) [BR:
hcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcl03009
]
NCTC13205_00690 (sfhB)
Enzymes [BR:
hcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NCTC13205_00690 (sfhB)
Ribosome biogenesis [BR:
hcl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC13205_00690 (sfhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
AbiEi_3_N
Motif
Other DBs
NCBI-ProteinID:
VEJ24547
UniProt:
A0A448UL04
LinkDB
All DBs
Position
1:complement(740775..741641)
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AA seq
288 aa
AA seq
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MRTFGYSQKEAQKILDKGWLSQRGRGVTKAECICAEVELLHFVPQRLFLKKLLLTPSFVV
YDKPPELLTHPRNTQGGLSVCDELKSEFGREANPAHRLDALTSGILVCSINKKKEGNLKG
LFERGEVKKTYQALIKGELKEEILIDAPILSPKAEGKFIDLKIRSMISPKGKSAQTLIRP
LCINNGVSLIEAYPLTGRTHQIRLHLAYLGMPILGDPLYGCDDVYSREFLDTALCMQKRK
EYFGMERLALHASRIEFEFEGEKIVVESEPTFQDPSSFDTNLSNLREY
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctttggatattctcaaaaagaagcgcaaaagattttagataagggttggctt
agccaaaggggaagaggagttacaaaggctgagtgtatttgtgcagaggtagaattattg
cattttgttcctcaacgactttttttaaaaaaactcctactcacccctagctttgttgtt
tatgacaaacccccagaacttcttacccatcctagaaacactcaaggagggctaagtgtg
tgtgatgagctcaagagtgaatttggcagagaggctaatcctgctcatcgacttgatgct
ctaacaagtggaattttggtgtgcagtattaataagaaaaaagagggaaatcttaagggg
ttatttgaaagaggagaagttaaaaagacttatcaagccctaattaaaggagagttgaaa
gaagaaatactcattgatgcgcccattctctcccctaaggcagaaggaaagtttatagat
ttaaagattcgctcaatgatttctcctaagggaaaatccgctcaaactttaatccgccct
ctttgtataaacaatggagtgagtttgattgaggcctatcctcttacaggacgcacacac
caaatccgcctccatcttgcatatttaggaatgcctattttaggagatccactctatggt
tgtgatgatgtttatagtagagagtttttagatactgctctctgcatgcagaaaagaaaa
gagtattttggaatggagcgattggcactgcatgcatcaagaatagaatttgaatttgag
ggagagaagattgtggtagagagcgaacctacttttcaagatccaagctcttttgacaca
aatctttccaacttgagagaatattaa
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