Helicobacter cetorum MIT 99-5656: HCD_00825
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Entry
HCD_00825 CDS
T02033
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hcm
Helicobacter cetorum MIT 99-5656
Brite
KEGG Orthology (KO) [BR:
hcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcm03016
]
HCD_00825 (trmE)
Transfer RNA biogenesis [BR:
hcm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HCD_00825 (trmE)
Prokaryotic type
Methyltransferases
HCD_00825 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Ras
ABC_tran
ATP_bind_1
Med14
MMR_HSR1_Xtn
cobW
AAA_29
ATP-synt_ab_N
Roc
Motif
Other DBs
NCBI-ProteinID:
AFI05197
UniProt:
I0EQH8
LinkDB
All DBs
Position
164196..165548
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AA seq
450 aa
AA seq
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MNETIVAIATPLGKGAISIVKISGNNALSILKQLTKKQDFTPRYAYVCDIFSNDILLDKA
LALYFKAPYSFTGEDVCEIQCHGNPLLTQNILQVCLNYGARLAKPGEFSKRAFLNHKMDL
SEVEASVQLILCEEQSSLNALARQLKGELKIFIEDARNTLLKLLASSEVLIDYSEEDIPS
DFLDEVSISLEAQIACFKDLLDFSNAQRERSKGHALSIIGKPNAGKSSLLNAMLLEERAL
VSDIQGTTRDTIEEVIELEGHKVRLIDTAGIRETTDKIERLGVEKSLKSLENCDIILSVF
DISKPLEKEDFNLIDTLNRTNKPCIIILNKNDLSPKLELETLKSHLKISYSLLETNTLDT
RTCLKDLSQKISEFFPKLDTQNKLLLTSTAQKNALENAINELQNAREHLETLELFSYHIL
SAIENLNALTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaccattgtagctatcgccacccccttaggtaaaggggcgattagcattgtt
aaaatcagtggcaacaacgccctaagcattctcaagcaactcacaaaaaaacaggacttt
acccctagatacgcctatgtgtgcgatattttttctaacgatattttgctagacaaagcc
ctagcactctatttcaaagctccctatagtttcacaggcgaagatgtgtgtgaaatccaa
tgccatggaaacccccttttaactcaaaacattcttcaggtctgtttgaattatggggct
aggcttgccaaacctggcgaatttagcaaaagagcctttttaaaccataaaatggatttg
agcgaagttgaagcaagtgtccagcttatcctctgcgaagagcaaagctctctaaacgcc
ctagccagacaactcaaaggcgaattaaaaattttcatagaagacgctagaaataccctt
ttaaaacttctagcaagttcagaagtcttaattgattacagcgaagaagacattcctagc
gattttttagacgaagtgtctataagtctagaagcccaaatcgcgtgttttaaggactta
ctggacttttctaacgcacaaagagaaagaagcaaagggcatgccttaagtattattggc
aaacctaatgctggcaaaagctcattattaaacgccatgcttttagaagaaagggctttg
gtgagtgatattcaaggcaccactagagataccatagaagaagtcatagaattagaaggg
cataaggtgcgtttgattgacaccgccggcattagggagactacagataaaatagagcga
ttaggggttgaaaaaagccttaaaagtttagaaaattgcgacatcatattaagcgtattt
gatatttctaaacccctagaaaaggaagattttaaccttattgacaccctaaatcgcacc
aataagccctgcatcattatcctcaataaaaacgatttatcgcccaagttagaacttgaa
acattaaaatctcatcttaaaatttcttattccttactagagacaaacactcttgataca
agaacttgtttaaaagatttgagccaaaaaatcagcgaattttttcctaaactagacaca
caaaacaagctcttactcacttccacagcccaaaaaaacgccctagaaaacgctattaac
gaattacagaatgctagagaacacttagaaaccttagaactcttttcctaccatatccta
agcgccatagaaaatttgaatgcactcactcgcccttatgaaaccagccaaatgctagat
agcatgtttagtgaattttgtttaggtaaatag
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