Helicobacter pylori HUP-B14: HPB14_04205
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Entry
HPB14_04205 CDS
T02035
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
hcn
Helicobacter pylori HUP-B14
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcn03032
]
HPB14_04205 (gyrB)
03400 DNA repair and recombination proteins [BR:
hcn03400
]
HPB14_04205 (gyrB)
Enzymes [BR:
hcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPB14_04205 (gyrB)
DNA replication proteins [BR:
hcn03032
]
Prokaryotic type
DNA Topoisomerases
HPB14_04205 (gyrB)
DNA repair and recombination proteins [BR:
hcn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPB14_04205 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFI07534
LinkDB
All DBs
Position
complement(868925..871246)
Genome browser
AA seq
773 aa
AA seq
DB search
MQNYQSHSIKVLKGLEGVRKRPGMYIGDTNVGGLHHMVYEVVDNAVDESMAGFCDTINIT
LTEEGSCIVEDNGRGIPVDIHPTEKIPACTVVLTILHAGGKFDNDTYKVSGGLHGVGVSV
VNALSKRLIMTIKKEGQIYRQEFEKGIPISELEIIGKTKSAKESGTTIEFFPDESVMEVV
EFQAGILQKRFKEMAYLNDGLKISFKEEKTQLQETYFYKDGLKQFVKDSAKKELLTPIIS
FKSMDEETRTSIEVALAYADDYNENTLSFVNNIKTSEGGTHEAGFKMGLSKAILQYIDNN
IKTKDSRPISEDIKEGLIAVVSLKMSEPLFEGQTKSKLGSSYARTLVSKLVYDKIHQFLE
ENPNEAKIIANKALLAAKAREASKKARELTRKKDNLSVGTLPGKLADCQSKDPLENEIFL
VEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSHLSKILKSEEIKNMITAFGCGIQESF
DIERLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLRPLIEQGHVYIAQAPLYKYKKGKTE
IYLKDSVALDHFLIEHGINSVDIEGIGKNDLMNLLKVARHYRYALLELEKRYNLLEILRF
LIETKDALSLDMKVLEKSILEKLEGLNYQILRSFATEESLHLHAQTPKGLVEFNLDDNLF
KEVLFEEANYTYQKLMEYNLDFLENKDILAFLEEVENHAKKGANIQRYKGLGEMNPNDLW
ETTMHKENRSLIKLKIEDLEKTDAIFSLCMGDEVEPRRAFIQAHAKDVKQLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattaccagagccatagtattaaggttttaaaaggcttagagggggttaggaaa
cgccctggaatgtatattggcgataccaatgtgggtgggttgcaccacatggtgtatgaa
gtcgtggataacgctgtagatgagagcatggcgggtttttgtgatacgattaacatcact
ttgactgaggaaggttcatgcattgtagaagataacgggcgaggcattcctgtagacatt
caccccacggaaaaaatccccgcttgcaccgtggttttaacgattttgcatgcagggggc
aagtttgataatgatacttataaagtttcaggcggtttgcatggcgtgggcgtttcggtt
gtgaacgccttgagcaaacgcttgattatgaccattaaaaaagagggtcaaatctatcgc
caagagtttgaaaagggtatccccattagcgagcttgaaatcattggcaaaaccaaaagc
gctaaagaaagcggcacgaccattgaatttttccctgatgaaagcgtgatggaagtcgtt
gaatttcaagcgggtattttgcaaaagcgcttcaaagaaatggcgtatcttaacgacggc
ttgaaaatttctttcaaagaagaaaaaacccaactgcaagaaacttatttctataaagac
ggcttgaaacaattcgtgaaagacagcgctaaaaaagaattgctcacccccattatttcg
tttaaaagcatggatgaagaaacgcgcacttctatagaggtcgctttagcgtatgctgat
gattacaatgaaaacaccttaagctttgtgaataacattaaaacttctgagggtggcacg
catgaggcgggctttaaaatgggcttgtctaaagcgattttacaatacattgacaataac
attaaaaccaaagattcgcgccccatttctgaagacattaaagagggcttgatcgctgtt
gtgagcttgaaaatgagcgagccgttatttgaagggcagactaaatccaaactcggcagc
tcatatgcgcgcacgttggtttcaaaattagtctatgacaaaatccatcagtttttagag
gaaaaccctaacgaagctaaaatcatcgctaataaagccctactagccgcaaaagctaga
gaagccagcaagaaagccagagagcttacaaggaaaaaggataatttgagtgtcggcact
ttgcctggaaaattagccgattgccagagtaaagaccccttagagaatgaaatcttttta
gtggagggcgatagtgcgggcgggagcgctaaacaagggcgcgatagggttttccaagcg
atcttgcccctaaagggtaagattttaaatgtggaaaaaagccatttgtcaaaaatccta
aaatcagaagaaattaaaaacatgatcacggcttttgggtgcggcattcaagagagtttt
gatatagaaagattgcgctatcataaaatcattatcatgaccgacgctgatgtggatggg
agtcatatccaaaccttgctgatgacttttttctatcgttatttacgcccattgattgaa
caagggcatgtttatatcgctcaagcccctctttacaaatacaagaaaggcaagacagaa
atttatcttaaagacagcgtcgctttggatcattttttaattgagcatggcatcaattcg
gtggatattgaagggattggcaagaacgatttgatgaatttattgaaagtggcgcgtcat
taccgctacgcgcttttggaattagaaaaacgctacaatttgctagaaattttacgcttt
ctcattgaaactaaggacgccttaagccttgatatgaaagttttagaaaaaagcattttg
gaaaaattagagggtttgaattatcagatcttacgctcttttgccactgaagaaagcttg
catttgcatgcacaaacccctaaaggcttggtggaatttaatttagatgacaaccttttt
aaagaagtgttgtttgaagaagcgaattacacttaccaaaagcttatggagtataattta
gatttcttagaaaataaggacattttggcgtttttagaagaagtggaaaaccacgctaaa
aagggagcgaatatccagcgctataaggggctaggcgagatgaaccctaatgatttatgg
gaaacgaccatgcataaagaaaaccgcagcttgatcaaactcaaaattgaagatttggaa
aaaaccgatgcgatcttttcgctttgcatgggcgatgaagtagagcctagaagagccttt
atccaagcgcatgctaaagatgtgaaacagttggatgtgtaa
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