Helicobacter pylori HUP-B14: HPB14_06965
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Entry
HPB14_06965 CDS
T02035
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hcn
Helicobacter pylori HUP-B14
Brite
KEGG Orthology (KO) [BR:
hcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcn03016
]
HPB14_06965 (trmE)
Transfer RNA biogenesis [BR:
hcn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPB14_06965 (trmE)
Prokaryotic type
Methyltransferases
HPB14_06965 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
ABC_tran
cobW
Ras
iSTAND
ATP_bind_1
MMR_HSR1_Xtn
AAA_29
ATP-synt_ab_N
nSTAND3
AAA_16
FtsK_SpoIIIE
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
AFI08065
LinkDB
All DBs
Position
1427770..1429122
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AA seq
450 aa
AA seq
DB search
MNETIAAIATPLGKGAISIIKISGHNALNILKQLTKKQDFTPRYAYVRDIFSDGVLLDKA
LVIYFKAPYSFTGEDVCEIQCHGSPLLAQNILQACLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARNNLLKLLASSEVLIDYSEEDIPS
DFLKEVSLNLEKQIASFKDLLDFSNAQKQKNKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESADKIERLGIEKSLKSLENCDLILGVF
DLSKPLEKEDFNLIDALNRAKKPCIVVLNKNDLAPKLELEILKSYLKIPYSLLETNTLNS
KACLKDLSQKISAFFPKLDTQNKLLLTSLAQKTALENAITELQNAKSHLETLELFSYHIL
SAIENLNLLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaccatcgccgctatcgctacccctttaggcaagggagcgattagcatcatt
aaaatcagcggccataacgccctaaacatcctcaaacaactcacaaaaaaacaagacttc
acccccagatacgcttatgtgcgcgatattttttctgatggtgttttattagacaaagcg
ttagtcatttatttcaaagccccttatagtttcaccggtgaagatgtgtgcgaaatccaa
tgccatggaagcccccttttagcgcaaaatatcttacaagcttgcttgaatttaggggct
aggcttgctaaagcgggggaatttagcaaaaaagcctttttaaaccataaaatggatttg
agcgagattgaagcgagcgttcagctcatcctttgtgaagatgaaagcgttttaaacgct
ctagccaggcagcttaagggcgagttaaaaatctttattgaagaagccaggaataatctt
ttaaagcttttggcgagctcagaagttttgattgattatagcgaagaagacattcctagc
gattttttaaaggaagtgtctcttaatttagaaaaacaaatcgcctcttttaaagattta
ttggatttttctaatgcgcaaaaacaaaaaaacaaagggcatgccttaagcattgttggc
aaacccaatgccggcaaaagctccctattaaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacaccatagaagaagtcattgaattacaaggg
cataaggtgcgcttgattgatacggccggtattagagagagcgcggataaaatagaacgc
ttagggattgaaaaaagccttaaaagtttagaaaattgcgaccttattttaggcgtgttt
gatctttctaaacccctagaaaaagaagattttaaccttatagacgcccttaatcgtgct
aaaaagccttgcattgtcgttttgaataaaaacgatttagcccctaagttggagcttgaa
atcttaaaatcttatcttaaaatcccttattctttactagaaaccaacaccctaaattcc
aaggcttgtttgaaagatttgagccaaaaaatcagcgcctttttccccaaactagacact
caaaacaagctcttactcacttccctagcccaaaaaaccgccctagaaaacgccattact
gaattgcaaaacgctaaaagccatttagaaactttagagcttttttcttatcacatttta
agcgcgatagaaaacttgaacttgctcacccgcccttatgaaaccagccaaatgcttgat
agcatgtttagcgaattttgcttgggcaaatga
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