KEGG   Halomonas chromatireducens: LOKO_02754
Entry
LOKO_02754        CDS       T04292                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
hco  Halomonas chromatireducens
Pathway
hco02020  Two-component system
hco02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LOKO_02754 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LOKO_02754 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hco03021]
    LOKO_02754 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:hco02035]
    LOKO_02754 (fliA)
Transcription machinery [BR:hco03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LOKO_02754 (fliA)
Bacterial motility proteins [BR:hco02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    LOKO_02754 (fliA)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 UPF0122
Other DBs
NCBI-ProteinID: AMD01806
UniProt: A0A109UMG3
LinkDB
Position
complement(2935450..2936121)
AA seq 223 aa
MLAEYLPLVRRQALSLQVRLPASIELDDLIQAGTVGLLEAMGRFDSSQGASFATFASQRI
RGAMLDELRSRDWLPRSVRRNARAVDEAVRRLEQQLGRHAEETEIAAELDMDLATYRQLL
NDTNSGHLLPFEALLAEGVEPGIADATADTPYKQLIDQQKRQQLVEGIEALPEREKLLMA
LYYQEELNLKEIGVVMGVTESRVCQLHSQAVSRLRSRLGEQAE
NT seq 672 nt   +upstreamnt  +downstreamnt
atgctggcggagtatcttccgctggtcaggcgacaggcgctctccctacaggtgcgccta
ccggcgagcatcgagctggatgacctgatccaggcgggtacggtcgggctgcttgaagcc
atggggcgtttcgactcctcccagggagcaagctttgccacctttgccagccagcgcatt
cgtggcgccatgctggatgagctcagaagccgggactggctgccccgcagcgtgaggcgc
aatgccagggcggtcgatgaggccgtcaggcggctggagcagcaactcgggcgacatgcc
gaggagacagagattgccgctgagctggacatggatctggcgacgtatcgccaattgttg
aacgataccaacagcgggcacttgctgccgttcgaggcgttgctggcggagggtgtggag
cccggtattgcagacgccacggcggatacgccttacaagcaattgatcgaccagcagaag
cgacagcagctggtggaggggatcgaggcgctaccggagcgggaaaagctattgatggcg
ctctactaccaggaggaactgaacctcaaggaaattggtgtcgtcatgggcgtgaccgag
tcacgggtctgccagctccacagccaggcggtcagccggcttcgcagccggctgggcgaa
caggcagagtag

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