Halomonas chromatireducens: LOKO_02754
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Entry
LOKO_02754 CDS
T04292
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
hco
Halomonas chromatireducens
Pathway
hco02020
Two-component system
hco02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hco00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOKO_02754 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LOKO_02754 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hco03021
]
LOKO_02754 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hco02035
]
LOKO_02754 (fliA)
Transcription machinery [BR:
hco03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LOKO_02754 (fliA)
Bacterial motility proteins [BR:
hco02035
]
Flagellar system
Flagellar assembly proteins
Stator
LOKO_02754 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AMD01806
UniProt:
A0A109UMG3
LinkDB
All DBs
Position
complement(2935450..2936121)
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AA seq
223 aa
AA seq
DB search
MLAEYLPLVRRQALSLQVRLPASIELDDLIQAGTVGLLEAMGRFDSSQGASFATFASQRI
RGAMLDELRSRDWLPRSVRRNARAVDEAVRRLEQQLGRHAEETEIAAELDMDLATYRQLL
NDTNSGHLLPFEALLAEGVEPGIADATADTPYKQLIDQQKRQQLVEGIEALPEREKLLMA
LYYQEELNLKEIGVVMGVTESRVCQLHSQAVSRLRSRLGEQAE
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgctggcggagtatcttccgctggtcaggcgacaggcgctctccctacaggtgcgccta
ccggcgagcatcgagctggatgacctgatccaggcgggtacggtcgggctgcttgaagcc
atggggcgtttcgactcctcccagggagcaagctttgccacctttgccagccagcgcatt
cgtggcgccatgctggatgagctcagaagccgggactggctgccccgcagcgtgaggcgc
aatgccagggcggtcgatgaggccgtcaggcggctggagcagcaactcgggcgacatgcc
gaggagacagagattgccgctgagctggacatggatctggcgacgtatcgccaattgttg
aacgataccaacagcgggcacttgctgccgttcgaggcgttgctggcggagggtgtggag
cccggtattgcagacgccacggcggatacgccttacaagcaattgatcgaccagcagaag
cgacagcagctggtggaggggatcgaggcgctaccggagcgggaaaagctattgatggcg
ctctactaccaggaggaactgaacctcaaggaaattggtgtcgtcatgggcgtgaccgag
tcacgggtctgccagctccacagccaggcggtcagccggcttcgcagccggctgggcgaa
caggcagagtag
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