Hippocampus comes (tiger tail seahorse): 109510379
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Entry
109510379 CDS
T04969
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
hcq
Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:
hcq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcq01009
]
109510379 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcq03019
]
109510379 (hdac6)
04131 Membrane trafficking [BR:
hcq04131
]
109510379 (hdac6)
03036 Chromosome and associated proteins [BR:
hcq03036
]
109510379 (hdac6)
Enzymes [BR:
hcq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
109510379 (hdac6)
Protein phosphatases and associated proteins [BR:
hcq01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109510379 (hdac6)
Messenger RNA biogenesis [BR:
hcq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109510379 (hdac6)
Membrane trafficking [BR:
hcq04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109510379 (hdac6)
Chromosome and associated proteins [BR:
hcq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
109510379 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
109510379
NCBI-ProteinID:
XP_019716188
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MSSGADDSPPLASSSSCGQKSVRRSPRLSPQGGVVQGNQRKKKSGSLQEAKKKGRMSRNR
EDRDEELQVELQRLDLSSRSSASGTGLVYSEIFTHHQNLWDPNHVESPARVTSIMEELDR
QGLLSRCVQVQPRAATDEDLLLVHTKHYIELIKSTQTMSETELHQFSDKYDSVYIHPETF
QVSILAVGSVLQLVDQVLTSKLRNGFAVIRPPGHHAQSNEANGFCVFNNVAIAARYAQNK
HKVKRVLIVDWDIHHGQGVQRVFQEDPSVLYVSVHRFERGAFWPHLPESDSTFVGGAPAE
GRNINLAWSAAGKSDADYMCAFQRLLLPVAYEFQPQLVLVSAGFDAALGDPKGQMCMSPE
CFQTLTHMLMSLAEGQLILALEGGYNLQATAKGAAACVRALLGGACAPMAPPTAPSDCAL
KSISESISALYPYWTSLQVLEGDHLAEGQVLGLATDEESPPCPAAMTTGLVYDERMMEHL
NLWDRHHPEQPQRIFKIFSRHQQLGLVERCQRIPSRFATEEELAMCHTADHIQQMKSTTT
MKNRDLHKLGQEFNSIYINNQSFKSALLAAGSCFNAVDHIMTGQVRSGVAIVRPPGHHAE
SGTACGFCFFNTAALAARYAQKTCRHAPVRVLILDWDVHHGNGTQHMFEDDNSVLYVSLH
RYDNGNFFPSSEDAAPNRVGVAKGTGFNVNVAWSGGRMGDAEYLAAFHHVVMPIAVEFNP
GLVLVSAGFDAARGDPLGGYRVTPECYAHLTHMLMSLACGRVLLILEGGYNLTSISDSMA
MCTSALLGDPPPSLATPLPPPHDAAVAAINEVIRHHAPYWKSLRINIPESLRAAIPSPSA
HRRRSGKGKGRRSRQSGPDQPPLPPAGLEGNTADHSLDQLTQGLASLDISPSAHPPDVEA
ESSEVTSERNRSRAKSSEVSPEQSRSAESSQPPVVIDPAPTDVDPGEEAEPGGACGWSKP
QGTLELTCGVQMAPMYVVDPLSWCPHLDAIKPLPPSGIDIFQHCQDCASEAENWICLTCY
KVACGRYVNEHMLMHGATADHPVVLSFCDLSVWCYACESYVHNQAVFEAKSAAHSAKFGE
EMPPWS
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctggagctgatgattctccaccattggcatcatcatcatcatgtggacaaaag
tcagttcggaggtctcctcgtctgtcccctcagggaggcgtagttcaaggtaatcagcgg
aagaagaaaagtggcagcttgcaggaggcaaagaagaaagggagaatgtcgaggaaccga
gaagaccgtgacgaggagcttcaggtggaactgcagcggctggacctgtccagcaggtca
tccgccagtggaacaggtttggtttattctgagatcttcacccatcatcagaacctgtgg
gaccccaatcatgtagaaagtccagccagagtgacatccatcatggaagagctggacaga
caagggctgctgtcacgctgcgttcaagtgcagcccagagcagccactgatgaagacctg
ttactcgtgcacacgaagcactacatcgagctgattaagtccactcagacgatgtctgaa
acagaactgcatcagttttctgacaaatatgattccgtttatatccatcccgagaccttc
caggtgtccatcttggcggtgggttcagtgctccagctagttgaccaggtgttgacatct
aaactgagaaacggctttgctgtcatcaggcctccaggacatcacgctcagtcaaacgag
gccaacggtttttgtgttttcaacaacgtggccattgcagctcgttacgctcagaacaaa
cacaaagtcaaaagggtgttgatcgtggactgggacattcatcacggtcaaggtgtccaa
cgtgtgttccaagaagaccccagcgtgctgtacgtgagcgtgcacaggtttgagcggggt
gccttctggcctcacctgccagagtctgacagcacatttgtgggcggcgcccccgccgaa
ggacgaaacatcaacctggcctggtccgcggccggaaaaagcgacgcagactacatgtgt
gctttccagcgactgctgctcccggtcgcctacgagtttcagccgcagctggttctggtg
tctgctggttttgatgccgcactgggggatcccaagggccagatgtgcatgagtcccgaa
tgtttccagacactgacacacatgctgatgtctttggcagaaggtcaactcattctggct
ctcgagggaggttacaacctgcaggcgacagcgaagggtgctgccgcttgtgttcgtgcc
ttgctggggggagcctgtgcaccaatggctccgcccactgctccgtctgactgtgccctg
aagtccatctctgagagcatctcagctttgtatccatattggacctcactgcaagtgctg
gagggcgaccatcttgctgaaggacaagtcctcggattagcaacggatgaggagagcccg
ccgtgtcccgctgccatgacaacgggcctggtgtacgacgagagaatgatggagcacctg
aacctgtgggacaggcatcatcctgaacagccgcaaagaatcttcaagatcttctcaagg
catcagcagctcggtctggtggaacgttgccagcgcattccgtctcgcttcgccaccgag
gaggagctcgccatgtgtcacacggcggaccacatccagcagatgaagtcgaccactacg
atgaagaacagggatttgcacaaactgggccaagagttcaactccatctacatcaacaat
cagagtttcaagtcagccctgctggccgccggaagctgcttcaatgctgtggaccacatt
atgactggacaggtgagaagcggcgtggctatcgtgcgtccccccggtcatcacgccgag
agtgggactgcgtgcggtttttgtttcttcaacacggcggcactcgccgctcgctacgcg
cagaagacttgccggcatgcgcccgtccgagtcttaatcctggactgggacgttcaccac
ggcaacggcacgcagcacatgtttgaagacgacaacagcgtcctctacgtctccctccat
cgctatgacaacgggaacttcttcccgtcctcggaggacgccgccccgaatcgggtggga
gtggccaaggggacgggcttcaacgtcaacgtggcgtggagcggcggcaggatgggtgac
gccgaatacctcgccgccttccaccacgtcgtcatgccgattgccgttgagttcaatcca
ggtctggtgttggtgtcggcgggattcgacgccgcgcggggcgaccctctgggcggatac
cgcgtgacccccgagtgctacgcacacctcacgcacatgctgatgtcgttggcttgtggc
cgagttttactcatattggagggcggttacaacttgacgtccatctccgactccatggcc
atgtgcacgagcgcgctgctgggtgatcctcctccttcgctggcgacgcccctcccccca
cctcacgacgccgccgtggcagccatcaatgaggtcatccggcaccacgccccctactgg
aagtcgttgcggataaacatccccgaatccctgcgagcagctataccttccccgagcgct
catcggaggcgcagtggaaaaggcaaaggcaggaggtcaagacagagtggtccagaccaa
ccacccctgccccctgctggactggagggcaacacagcagaccacagtttggaccaactc
acacaaggtttggccagcttggacatcagtccaagcgcgcacccgcccgacgtggaagcg
gagtcaagtgaagtgacgtctgagcggaaccggtccagggccaagtcgagtgaagtgtcc
cctgagcagagccgatcagcagaaagctcacagccaccagtcgtcatcgaccccgcacca
acagatgttgaccctggggaggaggcggagcctgggggagcgtgcggttggtccaagcct
caaggaactctggagctgacgtgtggcgtgcagatggcccccatgtatgtggtggaccct
ctgtcctggtgtcctcacctggacgccatcaagcccctgcccccatctggtatcgatatc
ttccagcactgtcaggactgtgcctcggaggcagagaactggatctgcctcacctgctac
aaggtggcgtgcggccgctacgtcaacgagcacatgttgatgcacggtgccacggccgat
catccggtggtgctgagtttctgcgacctctccgtgtggtgctatgcgtgcgagtcctac
gtgcacaaccaggccgtgtttgaagcgaagagcgccgcccacagcgccaagtttggagag
gagatgccgccctggagttag
DBGET
integrated database retrieval system
