Hyphomicrobium denitrificans ATCC 51888: Hden_3161
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Entry
Hden_3161 CDS
T01265
Name
(GenBank) helicase domain protein
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
hdn
Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:
hdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hdn03029
]
Hden_3161
Enzymes [BR:
hdn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Hden_3161
Mitochondrial biogenesis [BR:
hdn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Hden_3161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
DUF5131
Motif
Other DBs
NCBI-ProteinID:
ADJ24956
UniProt:
D8JW77
LinkDB
All DBs
Position
complement(3231421..3234600)
Genome browser
AA seq
1059 aa
AA seq
DB search
MISDLEARIRNVTAVLGPTNTGKTHLAIERMLGHNSGMIGLPLRLLAREVYDKIKARAGV
ENVALITGEEKIKPERARYWVSTVEAMPRDIDVDFLAIDEIQLAGDPERGHVFTDRLLHA
RGRSETLLLGAQTMREAISDLIPGANFISRPRLSKLTYTGEKKITRLPARSAIIAFSAQE
VYALAELIRRQRGGAAVVLGALSPRTRNAQVALYQSGDVEFIVATDAIGMGLNLDIDHVA
FSALRKFDGQNHRNLTPGEIGQIAGRAGRHMNDGTFGVTGGAEPLDADAVERLETHSFDS
VRTLQWRNRNLDFSSLSALHESLRQLPREQRLARARTADDVAALEALSADREIADIASTR
DNVALLWDVCQVPDYRKISGQSHAELISNLYRHLTSGTHKIPEDWFAKQVALADRTDGDI
DTLATRIAHIRTWTFVANRPAWLSDPVQWQERTRAVEDSLSDALHECLTQRFVDRRTSAL
MKGMRDKEELTADIAEDGAITVESHFVGRLKGFCFTLDSAGDGIHERATRQAAMQVVTRE
LGMRARRVSAAQSDAFKLTRTGVVVWRDDEIAKLERSEDPLQPGLSLIADEHMSESDREK
VQARLKTWLDDTIADKLKPLVDMSTSGELQGLARGIAFQLKENLGALKRETVADDVNSLD
QAARAELRKYGLRFGAFNIFFPLLLKPAAADLAATLWLLKNSATVNGTPQLPRPGLTSVV
TDPSVPEALYRAHGFHVCGPRAVRLDILERLADLIRPLLAWRSSPERADAPPKGSTGDGG
FKATDDMMSILGCSSGELGEVLKSLGFRLERRPIAPAPAAAPADVAADASASAAPAPDAN
AEASSEAETQQPAEEAGTAAVATALPAETSEAEASAPVAAENAETPAATQAEAETEKFEE
IWRPRRHHRREGGHRDHRDTHHRRGKPRHDRGPASAPASDANAAPAAAAAPASDTSAPSD
QQSARPRFERHDGGKPRRDHEKRPNRQGDHRHGDQRKGDHRQGDHRHGEGRRRDEPRRAP
QVITAAPPKSGSADSSSPFAALAALKAQMEKRSEGSGST
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgataagtgatctcgaggcccgcattcgcaacgtcactgcggtgctcggaccgaccaat
accggcaagacgcatctcgcgatcgagcgcatgcttggccacaacagcggcatgatcggc
ctgccgctgcgtctgctcgcgcgcgaggtctacgacaagatcaaagcgcgcgccggcgtc
gagaacgtcgccctcatcacgggcgaggaaaaaatcaaacccgagcgcgcccgctactgg
gtctcgaccgtcgaagcgatgccgcgcgatatcgacgtcgacttccttgcgatcgacgaa
atccagcttgcgggcgatcccgaacgcggccacgtcttcacggatcgcctgttgcacgca
cgcggacgctcggaaacgctgctgctcggcgcgcagacgatgcgcgaggcgatttccgat
ctgatccccggtgcgaatttcatctcccgtccgcgcttgtcgaagctgacgtacacgggc
gagaaaaaaatcacgcgccttcctgctcgttcggcgatcatcgcgttctcggctcaggaa
gtttatgcgcttgccgaactgatccgccgtcagcgtggcggtgccgccgtggtgctcgga
gcgctgtcgccgcgcacgcgcaatgcgcaggtcgcgctctatcagtccggcgacgtggaa
ttcatcgtcgcgaccgacgccatcggcatgggtttgaacctcgatatcgatcacgtcgca
ttctcggccttgagaaaattcgacggccagaaccatcgcaatctgacaccgggtgagatc
ggccagattgccggccgcgccggtcgccatatgaacgacggaacgttcggcgtgacgggg
ggcgccgagccgctcgatgccgacgccgtcgaacgcctcgaaacgcacagcttcgatagc
gtgcgcacgctgcagtggcgcaatcgcaacctcgatttcagctcgctttcagccttgcat
gagtccttgcgtcagctcccgcgtgagcagcgcctggcgcgcgcccgcacggccgacgac
gtcgccgcgctcgaagcgttgagcgccgatcgcgaaatcgccgatatcgcctcgacgcgc
gacaacgtcgctctgctctgggacgtctgtcaggttccggactaccgcaagatttccggc
caaagccatgccgaactgatttccaacctctaccggcacttgacctccggcacgcacaaa
attccggaggactggttcgcaaagcaggtggcattggccgatcgcaccgacggcgacatc
gatacgctcgcgacgcgcatcgcacatattcgcacgtggacgttcgtcgccaaccgcccg
gcttggctgagcgaccccgttcaatggcaggaacgaacacgggcggtagaggatagtctt
tccgacgcacttcacgaatgcttgacgcagcgtttcgttgaccgccggaccagcgcactg
atgaagggcatgcgagacaaggaagaattgacggcggatatcgccgaggacggcgcgatc
acggtggaaagccacttcgtcggccgcttgaagggcttttgcttcacgctggattcggcc
ggtgacggcatccacgagcgcgcaacgcggcaggccgcgatgcaggtcgtgacccgtgag
cttggcatgcgcgcacggcgcgtatcggcggcacagagcgatgcgttcaagctgacgcgc
accggcgtcgttgtctggcgcgacgacgaaatcgccaagctcgaacggtccgaggatccg
ctgcagcccggcttgtcgctgatcgccgacgaacacatgagcgagtcggatcgcgaaaag
gtccaggcgcgtctcaaaacctggctcgacgatacgatcgccgacaagctgaagccgctc
gtcgacatgtcgacgagcggcgagctgcaaggcctcgcgcgcggcatcgcgtttcagttg
aaggaaaatctcggggcattgaagcgcgagaccgttgcggacgatgtcaactcgctcgat
caggccgcgcgcgccgaactgcgcaagtacggactgcgctttggcgcgttcaacattttc
ttcccgctcctgctgaaaccggccgccgccgatctcgcggcgacgctctggcttttgaag
aacagtgcgaccgtgaacggcacgccgcagttgccgcgtccgggtttgacgtcggtcgtc
accgacccgagcgtaccagaagcgctctatcgcgcgcacggattccacgtgtgcggaccg
cgcgccgtccgtctcgacattctcgagcgtctcgcggatttgatccgtccgctgctcgcc
tggcgctcgtcgccggaacgggctgacgcgccgcccaaaggctcgaccggcgacggcggc
ttcaaggcgaccgacgacatgatgtcgatcctcggctgctcgtccggagaactgggcgaa
gtcctgaagtcgctcggcttccggcttgagcggcgcccgatcgcgcccgcaccggcagcg
gcaccggccgacgttgctgccgatgcatcggcatcagctgcacctgctccggacgcaaat
gcggaagcgtcgtctgaagccgagacgcagcagcccgcggaggaagccggaacagccgct
gttgcgacagctctgcctgccgaaacctccgaggctgaagcttcagcgcccgtggcggcc
gaaaacgccgaaacgcctgccgcaacgcaagccgaagccgaaacggaaaaattcgaagag
atctggcggccgcgacgccatcatcgccgcgaaggcgggcatcgcgatcaccgcgacacg
caccaccggcgcggcaagccacgtcacgatcgtggtcctgcctccgctccggcatctgac
gcaaacgctgcgccagccgcagcggcagcgcccgccagcgataccagcgcgccgtcggac
cagcagtccgcgcgcccgcgcttcgagcgtcacgacggcggcaagcctcggcgcgatcac
gagaagcgccccaaccggcagggcgatcatcgccacggcgaccagcgcaaaggtgatcat
aggcaaggcgatcatcgtcatggcgaaggacgccgccgcgatgagccccgccgcgcgccg
caggtcatcaccgcagcgccgccgaagtccggctccgccgactcgtcctcgcccttcgcg
gccctcgccgcgctcaaggcgcaaatggagaagcgcagcgaaggttccggttcgacctga
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