Hyphomicrobium denitrificans 1NES1: HYPDE_33048
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Entry
HYPDE_33048 CDS
T02646
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hdt
Hyphomicrobium denitrificans 1NES1
Brite
KEGG Orthology (KO) [BR:
hdt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hdt01002
]
HYPDE_33048
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
HYPDE_33048
Peptidases and inhibitors [BR:
hdt01002
]
Cysteine peptidases
Family C82
HYPDE_33048
Peptidoglycan biosynthesis and degradation proteins [BR:
hdt01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HYPDE_33048
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PAD_porph
Motif
Other DBs
NCBI-ProteinID:
AGK58282
UniProt:
N0B7N4
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All DBs
Position
2066382..2067725
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AA seq
447 aa
AA seq
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MIVHRSTEAMDFAQRAGRAFLATMLALAFIIASGAGCLGFGRAAAQSTAWIQFGPVGNGP
GTTNTYDPDFVREWEANPPKGYATLSKANIAATKNAIQRYTNIVAQGGWPQLPEPPNKTP
RDSLLQYGITDPAVGLLRKRLAASGDLSDSDTSSTYFDMSVDKALKRFQASNGLTPTGIA
DKRTIVALNVPADARLKQLKANVSRLGEFVPKAGKKYVVVNIPAAQVEAVQNGQIVARYA
AVVGKADRPTPLLHTPITDLSFNPVWRLPPTVISEDLIPRGREMQAKGQNVLLKFGIDAY
SNGKKVDPTKINWDNVKPGTYTYSQQPGKENPLGFLKINFDSAHSVYMHDTPSDRIFGRN
FRSASSGCIRVHNIENLAAWLLADQRGWDAERIASMKTTGERLDLRLKRPVQLLFVYISA
WATPDGVIQFRRDIYQKDGIGEIASNY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgcaccggtctacagaagcaatggacttcgcgcagcgcgcagggcgagcattt
ctcgccaccatgctggcgctcgcttttatcatcgcatcaggcgcggggtgccttggattc
ggacgggcggccgcgcaaagcacggcctggattcaattcggacccgtcggcaatggtcca
ggaacgacgaacacctacgatccggatttcgttcgcgagtgggaagccaacccgccgaaa
ggctacgcaacgctttcgaaagccaacatcgccgcaacgaagaacgcgatccagcgctat
acgaacatcgtcgcccaaggcggttggccgcaactgccggagccaccgaacaagactccg
cgcgacagcctcctgcagtatgggatcaccgatcccgccgtcggcctgctgcgcaagagg
ctcgcggcgtcgggcgacctgtcagacagcgatacgtcgtcaacgtatttcgatatgagc
gtcgacaaggccctgaagagatttcaggcgtcgaatggcctgacaccgaccggcattgcc
gacaagcgcacgatcgttgcgctcaacgtccctgccgatgcgcggctgaaacaattgaag
gccaacgtcagccgccttggggaattcgtgcccaaggccggcaagaaatacgtggtggtc
aacattccggctgcgcaggtcgaagccgtccagaacggccagatcgtagcgcgctacgcc
gccgttgtcggcaaggccgaccggccgactcctctactgcacacgccgatcaccgatctg
agcttcaacccggtctggcgcctgccgccgacggtcatctctgaagacctcattccacgc
gggcgtgaaatgcaggcgaagggccagaatgtccttctgaagttcggcatcgacgcctac
tccaacggcaagaaggtcgacccgacgaagatcaactgggacaacgtcaaacccggtacc
tacacgtatagtcagcaaccgggaaaagaaaatccgctcggcttcctgaaaatcaacttt
gacagcgcgcactcggtctacatgcatgacacgccgtcggaccgcatcttcggacgcaat
ttccggtcggcaagctcgggctgcatccgcgtgcacaacatcgagaatctcgcggcgtgg
ctgctcgccgatcagagaggctgggacgccgagcgcatcgcttcgatgaaaacgacgggc
gagcggctcgatctgcgtctcaagaggccggtgcagcttctgttcgtctatatcagcgcc
tgggcgacgcccgacggcgtcatacagttccggcgcgacatttaccagaaagacggtatc
ggcgagatcgcgtcgaattattga
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