Herbaspirillum sp. meg3: hmeg3_19025
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Entry
hmeg3_19025 CDS
T05024
Name
(GenBank) LacI family transcriptional regulator
KO
K23508
galactofuranose transport system substrate-binding protein
Organism
hee
Herbaspirillum sp. meg3
Pathway
hee02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hee00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
hmeg3_19025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hee02000
]
hmeg3_19025
Transporters [BR:
hee02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
hmeg3_19025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Aminotran_5
ABC_sub_bind
Bmp
B12-binding
Helicase_C
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
ASU40174
UniProt:
A0A223PDR2
LinkDB
All DBs
Position
complement(4230539..4231510)
Genome browser
AA seq
323 aa
AA seq
DB search
MKMTRRTLLGAAVCMTLGLGVMSTAMSADKPLTMGFSQVGAESEWRTANTVSIKDAAKKA
GVNLKFADAQQKQENQVKAIRSFIAQKVDVIAFSPVVESGWDTVLREAKAAKIPVILTDR
AVNVTDKSLYVTFIGSDFVEEGRRAARWLLDRAKTMPAGDINIVELQGTVGSAPAIDRKA
GFEEIIKTNPNLKIIRSQTGDFTRAKGKEVMEAFLKADGKKINVLYAHNDDMAIGAIQAI
EEAGLKPGKDILVISIDGVKGAFEAMMAGKLNVTVECSPLLGPQLMSIAKDVKAGKEVPK
RITTEEGVFPAEVAAKEFPNRKY
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgacacgcagaacactgctgggcgccgccgtttgcatgactttgggcttgggc
gtcatgtccaccgccatgtccgcagacaagccgctgacaatgggtttttcgcaagtcggc
gccgaaagcgaatggcgcaccgccaataccgtttcgatcaaggacgcggccaagaaggcc
ggcgtaaacctgaaattcgccgatgcgcagcaaaagcaagagaaccaggtcaaggcgatc
cgctctttcatcgcacaaaaagtcgacgtgatcgctttctcgccggtggttgagtcgggc
tgggacaccgtcctgcgcgaagccaaggccgccaagatccctgtgatcctgactgaccgc
gccgtcaacgtcaccgacaaatcgctgtatgtgactttcatcggatccgatttcgttgaa
gaaggccgccgtgccgcacgctggttgctggatcgcgccaagaccatgcctgccggcgac
atcaacatcgtcgaattgcaaggtactgtcggctcggcaccggcaatcgaccgcaaggcc
ggtttcgaagaaatcatcaagaccaatccgaacctgaagatcatccgctcgcaaaccggc
gatttcacccgcgccaagggcaaggaagtgatggaagctttcttgaaggctgacggcaag
aagatcaatgtgctttacgcgcataacgacgacatggccatcggcgctattcaggcgatc
gaagaagccggcctgaaaccgggcaaggatatcctcgtgatctccatcgacggcgtaaag
ggcgcgtttgaagccatgatggccggcaagctcaacgtcaccgtcgagtgcagcccgttg
ctcggaccacaactcatgtcgatcgccaaggatgtgaaggccggcaaggaagtgccgaag
cgcatcacaacggaagaaggcgtattccctgcggaagtggcagccaaggaattccctaat
cgtaaatattga
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