Herbiconiux sp. L3-i23: L3i23_09030
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Entry
L3i23_09030 CDS
T08550
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
heh
Herbiconiux sp. L3-i23
Pathway
heh03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
heh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
L3i23_09030 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
heh03400
]
L3i23_09030 (ku)
DNA repair and recombination proteins [BR:
heh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
L3i23_09030 (ku)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF5321
Motif
Other DBs
NCBI-ProteinID:
BDI22127
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All DBs
Position
969108..969914
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AA seq
268 aa
AA seq
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MRSIWKGAITFGLVNVPVKVYSATEDHDVPLHQVHDKDGGRIRYQRRCEIDGEIVDYEHI
VKAYDDGDKTVVITNEDLKSLPVEKSREIDVVEFVPSDQIDPIRYDKSYYLEPDSKSAKA
YVLLRRTLEESERTAIVKFALRQKTRLAALRVMDDVLLLQTLLWDDEVREAGFPSLKGDV
EISDRELKMSASLVASFESDFEPSKFSDDYQAQLRQLIDAKLEQGESLDTAATFGEGDED
EDGGEVLDLMEALKRSVEQSRAKKKKGA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccatctggaagggcgccatcacgttcgggctcgtcaacgtgcccgtcaaggtc
tactcggccaccgaggatcacgacgtgccgttgcaccaggtccacgacaaggacggtggg
cgcatccgctaccagcgtcgctgcgagatcgacggcgagatcgtcgactacgagcacatc
gtcaaggcctacgacgacggcgacaagaccgtcgtgatcacgaacgaggatctgaagagc
ctccccgtcgagaagagccgcgagatcgacgtggtggagttcgtgccgagcgatcagatc
gacccgatccgttacgacaagagctactacctcgagcccgactcgaagtcggcgaaggcg
tatgtactgctgcgccgcactctcgaagagagcgagcgcaccgcgatcgtgaagttcgcg
ctgcgacagaagacccgcctcgccgccctccgcgtcatggacgacgtgctgctgctgcag
accctgctctgggacgacgaggtgcgcgaggccggcttcccgtcgctgaagggcgacgtg
gagatctcggatcgagagctcaagatgtcggcctcgctcgtggcgagcttcgagagcgac
ttcgagccgtcgaagttcagcgacgactaccaggcgcagctgcgtcagctgatcgatgcg
aagctcgagcagggcgagtctctcgacaccgcggccaccttcggcgagggcgacgaggac
gaggacggcggcgaggtgctcgatctcatggaggcgttgaagcgcagcgtcgagcagtct
cgcgcgaagaagaagaaaggcgcctag
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