Helicobacter pylori F32: HPF32_1144
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Entry
HPF32_1144 CDS
T01911
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
heq
Helicobacter pylori F32
Pathway
heq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPF32_1144 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
heq03019
]
HPF32_1144 (pnp)
03016 Transfer RNA biogenesis [BR:
heq03016
]
HPF32_1144 (pnp)
Enzymes [BR:
heq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HPF32_1144 (pnp)
Messenger RNA biogenesis [BR:
heq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HPF32_1144 (pnp)
Transfer RNA biogenesis [BR:
heq03016
]
Prokaryotic type
tRNA degradation factors
HPF32_1144 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
S1_2
Motif
Other DBs
NCBI-ProteinID:
BAJ58726
LinkDB
All DBs
Position
complement(1227046..1229112)
Genome browser
AA seq
688 aa
AA seq
DB search
MDFITITSSNKTEEFALKQVAKQAISSLMYRLGKTIILASVCVEREPVSEDFLPLVVQFL
EKSYAAGKIPGGFVKREGRAQDFEILTSRLIDRTLRPLFPKDYRYPTQITLMVLSHDIEN
DLQVSALNAASAALFLSHIAPIKSVSACRIARIDNEFIINPSTSLLNQSSLDLFVSGTKE
SLNMIEMRSLGQQLNALEEPLMLKALELAQRSLKETCTLYEEIFTPHQNELLFKESQGII
FNERLLDLLKNQYFDEIIKGIESSALSERENVFNEIARKISEAHSEFSLEEIELSLEKVK
KTEIRRMIIKDKIRPDKRALEEVRPILIESDLLPMAHSSILFTRGQTQSLVVGVLGTDND
AQTHESLEHKAPIKERFMFHYNFPPFCVGEASSIGATSRRELGHGNLAKRALETSIKNKE
QVIRLVSEILESNGSSSMASVCAGSLALYASGVEIYDLVAGVAMGMVSEGQDHAILSDIS
GLEDAEGDMDFKIAGNLEGITAMQMDTKMSGIQLEVLYQALLQAKKAREHILKIMHEAKE
KIVINFSHLPATEIFNVAPDKIVEIIGQGGRVIREIVEKFEVKIDLNKPSGEVKIMGNKE
RVLKTKEFILNYLHSLDQELEQYAIDEVLEAQVKRIVDFGAFLSLPKGGEGLLRKQNMDR
CQVVLKEGDSIRCRVISFNKGKIALDLA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggattttatcaccatcacttctagtaacaaaaccgaagaattcgctctcaaacaagtg
gccaaacaagccatcagctctcttatgtatcgcttaggaaaaaccatcattttagcgagc
gtgtgcgtggaaagagagcctgtgagtgaagattttctgcctttagtggtgcagttttta
gaaaaatcttatgcagccggaaagatcccaggcggctttgttaaaagagaaggcagagcg
caagattttgaaatcttaacctctaggcttatagataggactttacgccctttattccct
aaagactaccgctaccctacacagatcactttaatggttttaagccatgatattgaaaat
gacttgcaagtttctgctttaaacgctgcttcagccgctctctttttatcccatatcgct
cccattaaaagcgtgagcgcttgcaggatcgctaggattgataacgaatttatcattaac
cctagcacaagccttttgaatcaatccagtttggatctgtttgtgtccggcacaaaagag
agtttgaacatgatagaaatgcgctctttagggcaacaattaaacgctttagaagagcct
ttaatgctaaaagctttagaattggctcaaagaagtttgaaagaaacttgcacgctttat
gaagagattttcacgccccaccaaaacgagctgcttttcaaagagagccaaggaataatt
tttaatgaaaggctgttagatctattaaaaaatcagtattttgatgaaatcatcaaaggc
attgaaagttctgctttgagcgagcgagaaaatgttttcaatgaaattgccagaaaaatc
agtgaagcccactcagaattcagtttagaagaaattgaattgtctttagaaaaagtgaaa
aaaactgagataagacgcatgatcattaaggataaaatccgcccggataagcgcgcgtta
gaagaagtgcggcccattttgatagagagcgatttgctccctatggcgcatagctccatt
ttattcactagggggcaaacgcaaagcttagtggtaggggttttaggcacggataatgac
gctcaaacccatgagagtttggagcataaagcccctattaaagagcgcttcatgtttcat
tataatttccctcctttttgcgtgggcgaagcgagctctattggcgcgacttcaaggcgc
gaattagggcatgggaatttggctaaaagagccttagaaacgagcattaaaaataaagag
caggtgatacgattggtttctgagattttagaaagcaatggttcaagctcaatggcgagc
gtgtgcgcaggctctttagccctttatgcaagcggtgtggaaatttatgatctagtcgct
ggggtggctatgggcatggtgagcgaagggcaagatcacgccattttaagcgatattagc
ggtttagaagacgcagaaggcgatatggattttaagattgccgggaatttagaaggcatt
acagccatgcaaatggatactaaaatgagcggtatccaattagaggttttataccaggct
ttactccaagctaaaaaagcgcgagagcatattttaaaaatcatgcatgaagcgaaagaa
aagattgtgatcaatttttcccatttgcctgcaacggagatttttaatgtcgcacccgat
aaaattgtagaaattatcggtcaaggggggcgtgtgatcagagagatagtagaaaagttt
gaggttaaaattgatttgaacaaaccgagcggtgaagtgaaaatcatggggaataaagaa
cgggttttgaaaacgaaggaatttattttaaactatttgcattctttggatcaagaattg
gagcaatacgctattgatgaggtgttagaagctcaagtgaagcgaatcgtggattttggg
gcgtttttaagcttgcctaagggaggcgaaggcttgttaagaaagcaaaacatggacagg
tgtcaagtggttttaaaagaaggcgatagcatcaggtgtagggtgattagtttcaataag
ggtaaaatcgctttggatttggcttaa
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