Helicobacter pylori F32: HPF32_1339
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Entry
HPF32_1339 CDS
T01911
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
heq
Helicobacter pylori F32
Brite
KEGG Orthology (KO) [BR:
heq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
heq03016
]
HPF32_1339 (trmE)
Transfer RNA biogenesis [BR:
heq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HPF32_1339 (trmE)
Prokaryotic type
Methyltransferases
HPF32_1339 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
ABC_tran
cobW
Ras
ATP_bind_1
Arf
MMR_HSR1_Xtn
iSTAND
AAA_29
FtsK_SpoIIIE
ATP-synt_ab_N
Roc
EF-G-binding_N
Motif
Other DBs
NCBI-ProteinID:
BAJ58921
LinkDB
All DBs
Position
1409950..1411302
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AA seq
450 aa
AA seq
DB search
MNDTIAAIATPLGKGAISVIKISGNNALNILKQLTQKQDFTPRYAYVRDIFSNGVLLDKA
LVIYFKAPYSFTGEDVCEIQCHGNPLLAQNILQVCLNLGARLAKAGEFSKKAFLNHKMDL
SEIEASVQLILCEDESVLNALARQLKGELKIFIEEARGNLLKLLASSEVLIDYSEEDIPS
DFLDEVSLNLEKQIASFKDLLDFSNMQKQKNKGHALSIVGKPNAGKSSLLNAMLLEERAL
VSDIKGTTRDTIEEVIELQGHKVRLIDTAGIRESADTIERLGIEKSLKSLENCDIVLGVF
DLSKPLEQEDFNLIDTLNRAKKPCIVVLNKNDLAPKLELEILKSYLKIPYSLLETNTLNS
KACLKDLSQKISAFFPKLDTQNKLLLTSLAQKTALENAIFELQNAKNHLETLELFSYHLL
SAIENLNSLTRPYETSQMLDSMFSEFCLGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccatcgccgctatcgctacccctttaggcaagggagcgattagcgttatt
aaaatcagcggcaataacgctctaaacatcctcaaacaactcacccaaaaacaagacttc
accccaagatacgcttatgtgcgcgatattttttctaatggtgttttattagacaaagcg
ttagtgatttatttcaaagccccctatagtttcaccggcgaagatgtgtgcgagatccaa
tgccatggaaacccccttttagcgcaaaatatcttacaagtttgcttgaatttaggggct
aggcttgctaaagcgggggaatttagcaaaaaagcctttttaaaccataaaatggacttg
agcgagattgaagcgagcgttcagctcatcctttgcgaagatgaaagcgttttaaacgct
ctagccaggcagcttaagggcgagttaaaaatttttattgaagaggctagaggcaatctt
ttaaagcttttagccagctcagaagttttgattgattatagcgaagaagacattcctagc
gattttttagatgaagtgtctcttaatttagaaaaacaaatcgcctcttttaaagactta
ctggatttttctaacatgcaaaaacaaaaaaacaaagggcatgccttaagcattgttggc
aaacccaatgctggcaaaagctccctattaaacgccatgcttttagaagaaagggcttta
gtgagcgatattaaaggcacaacaagagacactatagaagaagtcattgaattgcaaggg
cataaggtgcgcttgattgatacggctggcattagagagagcgcggatacaatagaacga
ttagggattgaaaaaagccttaaaagtttagaaaattgcgacatcgttttaggcgtgttt
gatctttctaaacccctagaacaagaagattttaaccttattgacaccctcaatcgcgct
aaaaagccttgcattgttgttttgaataaaaacgatttagcacccaagctggagcttgaa
atcttaaaatcttatcttaaaatcccttattctttactagagaccaacaccctaaattcc
aaggcttgtctgaaagatttgagtcaaaaaatcagcgcctttttccccaaactagacact
caaaacaagctcttgctcacttccctagcccaaaaaaccgccctagaaaacgccattttt
gaattgcaaaacgctaaaaaccatttagaaactttagaacttttttcttatcatctttta
agcgcgatagaaaacttgaactcgctcacccgcccttatgaaaccagccaaatgctagac
agcatgttcagcgaattttgcttaggcaaatga
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