Helicobacter pylori Rif1: C695_07910
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Entry
C695_07910 CDS
T02317
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
her
Helicobacter pylori Rif1
Pathway
her03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
her00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C695_07910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
her03400
]
C695_07910
Enzymes [BR:
her01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C695_07910
DNA repair and recombination proteins [BR:
her03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C695_07910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
RecG_dom3_C
AAA_30
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AFV44342
LinkDB
All DBs
Position
complement(1602103..1603974)
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AA seq
623 aa
AA seq
DB search
MQETDNLLKTLNVKSLLEALLVYTPKGYKDLNLLERFETGLSGVLEVGILEKRNYAKVLK
IFAYSKRFYKNLELVFFNYSAFHHSQFKTGESLFIYGKLEQSSFNQAYIINTPKIITKFG
KISLIFKKVKNHKKIQENLQKLISLENLKKEGVKENIAHLLLEIFFPTPHFVKDFETNKN
FPSQHLNALKYIEMLFYMKNLERKKLQFGAKIACPNNNERLKAFIASLPFKLTRDQQNAI
KEIQNDLTSSIACKRLIIGDVGCGKTMVILASMVLTYPNKTLLMAPTSILAKQLYNEALK
FLPPYFEVELLLGGSYKKRSNHLFETITHVVIGTQALLFDKRDLNEFALVITDEQHRFGT
KQRYQLEKMASSKGNKPHSLQFSATPIPRTLALAKSAFVKTTMIREIPYPKEIETLVLHK
RDFKIVMEKISEEIAKNHQVIVVYPLVNESEKIPYLSLSEGASFWQKRFKKVYTTSGQDK
NKEEVIEEFRESGSILLATTLIEVGISLPRLSVMVILAPERLGLATLHQLRGRVSRNGLK
GYCFLCTIQEENERLEKFADELDGFKIAELDLEYRKSGDLLQGGEQSGNSFEYIDLAKDE
NIIAEVKRDFLKAASVSRGTFEN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagaaacagataatttattaaaaacattgaatgtgaaatcgcttttagaagccttg
cttgtttatacgcccaaaggctataaagatttaaatttattagagcgttttgaaacgggc
ttgagcggcgttttagaagtgggtattttagagaaaagaaactacgccaaagttttaaag
attttcgcctattccaaacgattttacaaaaatttagagcttgtttttttcaattacagc
gcgttccatcacagccagtttaaaaccggcgagagtttgtttatttatggtaaattagag
caaagctcttttaatcaagcttatatcattaacacgcctaaaatcattaccaaatttggt
aaaatttctttaatttttaaaaaagttaaaaatcataaaaaaatacaagaaaatttacaa
aaactcatttctttagaaaatttaaaaaaggaaggcgttaaagagaatatcgcgcattta
ttgttagaaatctttttccccacgccgcattttgtcaaggattttgaaacgaataaaaat
tttccttcacaacatttaaatgcattaaaatacattgaaatgcttttttatatgaaaaat
ttagagcgcaaaaaattgcaatttggcgctaaaatcgcatgccccaataataacgagcgc
ttgaaagcgtttatcgcttctttaccctttaaactcacacgcgatcaacaaaacgccatt
aaagaaatccaaaacgatctcactagctccatagcgtgcaagcgtttgattataggcgat
gtggggtgcgggaaaacgatggtgattttagcgagcatggtattaacttacccaaataaa
acccttttaatggcgcccacttccattctcgctaaacagctttataacgaagccttaaaa
tttttacccccttattttgaagtggaattgctgctcggcgggagttacaagaagcgatcc
aatcatttgtttgaaacaatcacgcatgtggttatcggcacgcaagcgttgttgtttgat
aagcgcgatttgaatgaattcgctctagtgatcactgatgaacagcaccgatttggcacc
aagcagcgctaccaattagaaaaaatggcaagcagtaagggtaataaaccccattctttg
caattttccgctacccccattcctcgcacgctcgccctagccaaaagcgcgtttgtgaaa
acgaccatgattagagaaatcccttatcctaaagagattgaaactctagtcttgcataaa
agagattttaaaatagtgatggagaaaatcagcgaagaaatcgctaaaaaccatcaagtc
attgtcgtctatccgctggtgaatgagagcgaaaaaatcccgtatttatcgctcagtgag
ggggcgagtttttggcaaaaacgctttaaaaaggtttataccacttcagggcaagataaa
aataaagaagaagtgattgaagaatttagagaatccgggagcattcttttagcgactacg
ctcattgaggtgggcatttctttaccacgattgagcgtgatggtgattttagcgcccgaa
aggttaggcttagcgactttacaccagttaagggggcgcgtttctcgtaacggcttgaaa
ggctattgttttttatgcacgatccaagaagaaaacgaacgattagaaaagtttgctgat
gaattggacggctttaaaatcgctgaattggatttagaatacagaaaaagcggggattta
ctccagggaggggagcagagcgggaatagttttgaatacattgacttagccaaagatgaa
aacattatcgctgaagtgaaacgggattttttaaaggccgctagcgtttcacggggaaca
tttgaaaattga
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