Helicobacter pylori F57: HPF57_1342
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Entry
HPF57_1342 CDS
T01912
Name
(GenBank) conserved hypothetical ATP-binding protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hex
Helicobacter pylori F57
Pathway
hex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPF57_1342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hex03019
]
HPF57_1342
Messenger RNA biogenesis [BR:
hex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HPF57_1342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B
RMMBL
RNase_J_C
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
BAJ60416
UniProt:
E6NTF0
LinkDB
All DBs
Position
complement(1420293..1422377)
Genome browser
AA seq
694 aa
AA seq
DB search
MTDNNHYENNENNENSTENSKAHHEARAGAFERFTNRKKRFRENAQKNAESSNHEAPSHH
KKERHPNKKPNHHHKAKHTPQKTRNYAQEELDNNKVEGVTEILHVNERGTLGFHKELKKG
VEANNKIQVEHLNPHYKMNLNSKASVKITPLGGLGEIGGNMMVIETPKSAIVIDAGMSFP
KEGLFGVDILIPDFSYLHQIKDKIAGIIITHAHEDHIGATPYLFKELQFPLYGTPLSLGL
IGGKFDEHGLKKYRSYFKIVEKRCPISVGEFIIEWIHITHSIIDSSALAIQTKAGTIIHT
GDFKIDHTPVDNLPTDLYRLAHYGEKGVMLLLSDSTNSHKSGTTPSESTIAPAFDTLFKE
AQGRVIMSTFSSNIHRVYQAIQYGIKYNRKIAVIGRSMEKNLDIARELGYIHLPYQSFIE
ANEVAKYPDNEILIVTTGSQGETMSALYRMATDEHRHISIKPNDLVIISAKAIPGNEASV
SAVLNFLIKKEAKVAYQEFDNIHVSGHAAQEEQKLMLRLIKPKFFLPVHGEYNHVARHKQ
TAISCGVPEKNIYLMEDGDQVEVGPAFIKKVGTIKSGKSYVDNQSNLSIDTSIVQQREEV
ASAGVFAATIFVNKNKQTLLESSQFSSLGIVGFKDEKHLIKEIQGGLELLLKSSNAEILN
NPKKLEDHTRNFIRKALFKKFRKYPAIICHVHAT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgactgataacaaccattatgaaaacaatgaaaataatgaaaacagcactgaaaactca
aaagctcatcatgaggcacgagccggagcgtttgagcgattcaccaaccgcaaaaagcgt
tttagagaaaacgcgcaaaaaaacgcagagtcttcaaaccatgaagcgccttcacaccat
aaaaaagagcgccaccccaacaaaaaaccaaaccaccaccacaaagctaaacacaccccc
caaaagactagaaattacgcccaagaagaattggataacaacaaagtagaaggcgttacg
gaaattttgcatgtgaatgagagagggactttaggctttcataaggagctaaaaaagggc
gttgaagctaataacaagatccaagtggagcatttaaacccgcattataagatgaatcta
aactctaaagcgagcgttaaaatcacgcctttagggggcttgggcgagattggggggaac
atgatggtcattgaaaccccaaaaagcgcaatcgtgattgatgcgggcatgagcttccct
aaagaggggctctttggcgtggatattttaatcccggatttttcctacttgcaccaaatc
aaggacaaaatcgctggcattatcatcacccatgcccatgaagatcacataggggccacg
ccttatttgtttaaagaattgcaattccccctttatggcacgcccttgagtttggggtta
attgggggcaagtttgatgaacatggtttgaaaaaataccgctcgtattttaaaatcgta
gaaaagcgttgccccattagcgtgggcgaatttatcattgaatggatccacatcacgcat
tctatcattgacagcagcgctttagcgatccaaactaaagccggaacgatcattcacacc
ggcgattttaaaatcgatcacaccccggtggataatttgcccactgatttgtatcgttta
gcgcactatggcgaaaagggggtgatgcttcttttaagcgattccactaactcccataaa
tccgggaccacaccgagtgaaagcaccatagcgccggcttttgatacgctttttaaagaa
gcgcaagggagagtgattatgagcacattctctagcaatatccaccgggtgtatcaagcc
atacaatacggcattaaatacaaccgcaagatcgctgtgatcgggcgctctatggaaaaa
aacctagacattgccagagaattaggctatatccatttgccttatcaatcttttattgaa
gccaatgaagtcgctaaatacccggataatgaaatcttaatcgtaacgaccggctcacaa
ggcgaaaccatgagcgcgctttatcgcatggcgacagatgagcaccgccacatttctatc
aaacccaacgatttagtcatcatctccgctaaagccattcctggcaatgaagcgagcgtt
tcagcggtattgaattttttaatcaaaaaagaagccaaagtggcttatcaagaatttgac
aatatccatgtgagcgggcatgccgcccaagaagagcaaaagctcatgttaagactcatc
aagcctaagtttttcttacccgtgcatggggaatataaccatgtcgcgcgccacaagcaa
accgctatttcttgcggggtgcctgaaaaaaatatctatttaatggaagatggcgatcaa
gtggaggttggccctgcgttcattaaaaaagtaggcacgattaaaagcggtaaaagctat
gtggataaccaaagcaatttgagtattgatacaagcattgtgcaacaaagagaagaagtc
gctagtgctggggtgtttgccgctacgatttttgtgaataaaaacaaacaaacgctttta
gaaagctctcaattttccagtttagggattgtgggctttaaagatgaaaagcatttgatt
aaagaaattcaaggaggattggagttgttattgaaatccagcaacgccgaaattttgaat
aaccctaagaaattagaagatcacacccgtaatttcatcagaaaagcgctctttaaaaag
tttagaaaatacccggctatcatttgccatgtccatgccacttga
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