Helicobacter felis: HFELIS_12110
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Entry
HFELIS_12110 CDS
T01375
Symbol
thdF
Name
(GenBank) putative thiophene and furan oxidation protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hfe
Helicobacter felis
Brite
KEGG Orthology (KO) [BR:
hfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hfe03016
]
HFELIS_12110 (thdF)
Transfer RNA biogenesis [BR:
hfe03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HFELIS_12110 (thdF)
Prokaryotic type
Methyltransferases
HFELIS_12110 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MnmE_helical
MMR_HSR1
FeoB_N
Dynamin_N
GTP_EFTU
AIG1
RsgA_GTPase
TniB
Ras
Roc
AAA_15
GCV_T
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CBY83295
UniProt:
E7A968
LinkDB
All DBs
Position
complement(1191396..1192769)
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AA seq
457 aa
AA seq
DB search
MISTNPNPSTIAAIATSPGRAAISIIKISGPDSLAILRALTHKLDFSPRRATLVCIYDQQ
GDLLDQSLALYFKAPHSYTGEDVVEIQCHGGVVVAKLILQACLQAGASLAQGGEFSKRAF
LNGRMDFSQIQALGTLLEANSARMVKAMARQLKGELRDFVTHTRHDILALLASSEALIDY
AEEDLPLDLYPRMHAQLQAILAKLENTLDVSRNARIEGYCLGLVGKPNVGKSSLLNALLL
KDRALVSSIAGTTRDTIEEYLELQGISLKLIDTAGIRTAQDAIEQLGIAKSLKSLQESDI
VLAIFDLSTPLESQDRQVIALLLEHAKNIIVVFNKSDCPAQLDTQEVLNLLQGKFSSALT
LSTTNPTHCLQSLRQALTPLLEDNPHDTLICASLAQQQALESTISHLNHAQSLLATQELE
LFSYHLQDALNSLATITQPYNVEEMLDSMFSQFCLGK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatttctacaaaccccaatcctagcaccattgctgctatcgccacttcgcccgggcgc
gcagcaatttctattatcaaaatcagtggcccggatagtcttgcgattttgcgcgccctc
acccacaagctcgattttagccccagaagggcgactttggtgtgcatttatgaccaacag
ggcgatcttttggatcagagtttagctctttattttaaagccccacacagctacacgggt
gaggatgtggtagaaatccaatgccatggaggggtggtggtagccaagctgatcttgcag
gcttgtttgcaggccggggcgagtttagcacaggggggcgagtttagcaaacgggctttt
ttgaatgggcggatggacttttcacaaatccaagccttaggcactcttttagaggctaat
agcgcgcgcatggtcaaggcgatggcacggcaacttaaaggcgaacttagggattttgta
acacacacccgccatgatattttggctctactagctagcagtgaagcgcttatcgattat
gccgaggaagatttgcctttagacttatatccccgtatgcacgcccagctacaagccatt
ctagccaaactagaaaacactttagatgtttctcgcaatgcccgcatagaggggtattgt
cttggtttggtaggaaaacccaatgtgggtaaaagttcccttctgaatgcgctgttactc
aaggatcgcgcgctggtgagttctatagcgggcacgactagagacaccattgaggaatac
ctagaattgcagggcataagccttaagctcatcgacacggctggaatccgcacagcgcaa
gatgctatcgaacaactagggattgctaaaagtcttaaaagcttacaggagagtgatatc
gtcctagctatctttgatctctccacacccttagaaagtcaagataggcaagtgatcgcc
cttcttttagaacacgccaaaaatatcattgtggtttttaacaaaagcgattgccctgcg
caattagacacgcaagaagttttaaacctcctgcaaggcaagttttctagtgccctcaca
ctaagcaccaccaaccccacccactgcctccaatctctgcgccaagccctgacacctctt
ttagaagacaatccgcatgacacgcttatctgtgcttccctagcccaacaacaagcccta
gagtctacgatttcccacctcaaccatgcacaaagtttgctagcaacccaagaactcgag
ctattttcctaccatctacaagatgcgctcaactctttggctactatcactcagccctat
aatgtcgaagaaatgttagattctatgttttcgcaattttgtttaggcaagtga
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