Herbaspirillum frisingense: G5S34_20800
Help
Entry
G5S34_20800 CDS
T06761
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hfr
Herbaspirillum frisingense
Brite
KEGG Orthology (KO) [BR:
hfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hfr03000
]
G5S34_20800
Transcription factors [BR:
hfr03000
]
Prokaryotic type
Helix-turn-helix
Other families
G5S34_20800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA_2
HTH_28
Mg_chelatase
RWP-RK
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QNB08951
UniProt:
A0A7G6B117
LinkDB
All DBs
Position
complement(4590863..4592017)
Genome browser
AA seq
384 aa
AA seq
DB search
MPTPPVEQPMAESDVQTADTAHTARSHRCAASRTAPRYRDIDQLAAGDELMRDLVERGKR
LIDRGIPVLILGETGTGKEYLSRALHDYSARRQAAWVAVNCASIPESLAESELFGYCKGA
FSGALPGGMKGKVQQADGGTLFLDEIGDMPFALQTRLLRVLSEREVIPLGAMRPVSVDLQ
LICATHQDLKTLIGEGRFREDLYYRVAGGVLRLPALRERADRRRLVMQMIADELGAAADE
NVIAPAALQRLLAYPWPGNLRQMHAVIRYSCAVMNGGRIELRDLPEELMQFQAMPLAQVH
SIGRTAQIRPFASRAEGDATSVVLTGDPYRDERTRVIAALNGSRWNISAASRQLGMCRAS
LYRKLRQLDIPHVRDQAMPAYAVA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgccgacacccccggtagaacagcccatggctgagagtgacgtccagaccgccgatact
gcccatactgcccgcagccaccgctgcgctgcttcccgcaccgcgccgcgctaccgtgac
atcgaccagttggctgcgggtgacgagctcatgcgcgatctggtggagcgcggcaagcgc
ctgatcgatcgcggcattccggtgttgatcctgggcgagaccggtaccggcaaggaatac
ctgtcgcgcgcgctgcatgactacagcgcgcgtcgccaggcggcgtgggtggcggtcaat
tgcgcctccatcccggaaagcctggccgagagtgaactgttcggttattgcaaaggggcc
ttctcgggcgcactgccaggcggcatgaagggcaaggtgcagcaggccgatggcggcacg
ctgttccttgatgaaatcggcgacatgccattcgccctgcaaacgcggctgctgcgggtg
ctgtccgagcgcgaggtgatcccgctgggggcgatgcgaccggtatcggtcgatctgcaa
ctgatctgcgcgacccaccaggatttgaagacgctgatcggcgagggacgcttccgcgaa
gacctttattaccgtgtcgcgggtggcgtgctgcgactgccagccctgcgcgaacgtgcc
gaccgtcgccggctggtgatgcagatgattgccgacgagctgggggcggctgccgacgag
aacgtcatcgccccggcggccctgcagcggctgctggcctatccatggccgggcaacctg
cgtcagatgcatgcggtgatccgctacagctgcgcggtgatgaatggcggtcgcatcgag
ctgcgcgacctgcccgaagaattgatgcaattccaggcgatgccgctggcccaggtccat
tccatcggccgcaccgcccagatccgccccttcgcgtcacgagccgaaggggacgccacg
tccgttgtgcttaccggcgatccgtaccgggacgagcgcacgcgcgttattgctgccttg
aatggcagtcgctggaacatctccgccgcttcgcggcaactgggaatgtgtcgtgcttcg
ctctaccgcaagctgaggcaactggatatcccgcacgtacgtgaccaggccatgccggct
tatgccgtggcctga
DBGET
integrated database retrieval system
