Haloferax gibbonsii: ABY42_03160
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Entry
ABY42_03160 CDS
T04025
Name
(GenBank) DNA-binding protein
KO
K22206
XRE family transcriptional regulator, thiamine biosynthesis regulator
Organism
hgi
Haloferax gibbonsii
Brite
KEGG Orthology (KO) [BR:
hgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgi03000
]
ABY42_03160
Transcription factors [BR:
hgi03000
]
Prokaryotic type
Helix-turn-helix
XRE family
ABY42_03160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiP_synth
HTH_3
HTH_31
HTH_23
Sigma70_r4
HTH_26
YdaS_toxin
HTH_37
MarR_2
HTH_24
P22_Cro
Sigma70_r4_2
HTH_28
HTH_20
RepB
TrbH
Cro
Xre-like-HTH
HTH_19
HTH_1
HTH_IclR
HTH_5
HTH_10
HTH_8
HTH_35
Motif
Other DBs
NCBI-ProteinID:
AKU06789
UniProt:
A0A0K1IQU8
LinkDB
All DBs
Position
582787..583686
Genome browser
AA seq
299 aa
AA seq
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MKFIEEIVVDAFLPTFRALLAEDLRDRGFTQSEVAEALGISQSAVSKYAHGEVATNERVA
TDPRVVDLVSRVGDGLATGDMTPVQALVEAEVLIRQLEEGDLLSDLHEEEMPELASHDGF
RSIHDPEGRLRTVEQVRSSVRRGLRMLTNTSGFAGLIPNVGSNLVESLPDADSVDDVAAI
PGRIFDVKGQATVPGEPEFGVSGHVAGVLLSARAAGADVNAALNIVYDAGVIEDLEAAGY
ECIEFDPDAPTDPVRELLTARDLPETFVVYQSGGYGIEPITYILGPDAPAVADVVRVLL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcatcgaagaaatcgtcgtggacgcgttcctcccgacgttccgcgcgctcctc
gcggaggacctccgcgaccgcgggttcacccagtcggaggtcgccgaggcgctcggcatc
agccagagcgccgtctcgaagtacgctcacggcgaggtcgccacgaacgagcgggtcgcc
accgacccccgcgtcgtcgacctcgtctcccgcgtcggcgacggcctcgccaccggcgac
atgacgcccgtgcaggcgctcgtcgaggccgaggtcctcatccgccaactcgaagagggt
gacctgctgtcggacctccacgaagaggagatgcccgaactcgcctcccacgacggcttc
cggagcatccacgaccccgagggtcgcctccgaaccgtcgagcaggtccgctcgtcggtc
cgccgcggcctccgcatgctcacgaacacctccggcttcgcggggctcatcccgaacgtc
ggctctaacctcgtggagtcgctcccggacgccgacagcgtcgacgacgtggccgccatc
cccggccgcatcttcgacgtgaaggggcaggcgaccgtccccggcgaacccgagttcggc
gtcagcggccacgtcgcgggcgtcctgctttcggcccgcgccgccggtgccgacgtgaac
gccgcgctcaacatcgtctacgacgcgggcgtcatcgaggacctcgaagccgcgggctac
gagtgcatcgagttcgacccggacgcgccgaccgacccggtccgcgaactcctcaccgcc
cgcgacctgccggagacgttcgtcgtctaccagagcggcggctacggcatcgagcccatc
acgtacatcctcggtcccgacgcgcccgccgtcgccgacgtggtccgcgtcctgctctga
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