Heterocephalus glaber (naked mole-rat): 101708706
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Entry
101708706 CDS
T02812
Symbol
Sox17
Name
(RefSeq) SRY-box 17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Pathway
hgl04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101708706 (Sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hgl03000
]
101708706 (Sox17)
Transcription factors [BR:
hgl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101708706 (Sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HTH_24
Motif
Other DBs
NCBI-GeneID:
101708706
NCBI-ProteinID:
XP_004837564
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All DBs
Position
Un
AA seq
412 aa
AA seq
DB search
MSSPDAGYASDDQSQPRSALPAVMAGLGPCPWAESLSPLGDMKVKGEVAASSGAPGGTTG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGHVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQALGAPPLDAYPLPTPDTSPLDSVEPDPAFFTAP
LPGDCPAAGNYSYAQVSDYAVPPEQPAGPLHPRLGPESAGPAMPGLLAPPSALHMYYGAM
GSPGAGGARGFHLPPPQQQHAPPGPGQGQPSPPPEALPCREATDPGQPAAELLGEVDRTE
FEQYLHFVCKPEMGLPYQGHDSSVSLLDSHGAISSVVSDASSAVYYCSYPDV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgaccagagtcagccccggagcgcgctg
cccgcggtgatggcagggctgggcccgtgcccctgggccgagtcgctgagccccctcggc
gacatgaaggtgaagggcgaggtggcggcgagcagcggagcgccgggagggaccacgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgctttcatggtgtgggcgaag
gacgagcgcaagcggctggcgcagcagaacccggatctgcacaacgcggagctgagcaag
atgctaggcaagtcctggaaggcgctgacgctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccatcccaactacaagtaccggccgcgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggcggcttcctgcacggcctcgcc
gagccacaggccgccgcgctgggccccgagggcggccacgtggccatggacggcctgggc
ctgcccttcccggagcagggcttccccgcgggcccaccgctgctgcccccgcacatgggc
ggccactaccgcgactgccaggccctgggcgcgcccccgctcgacgcctacccgctgccc
acgcccgacacgtccccgctggacagcgtggagccagacccggccttcttcacggcgccg
ctgcccggggactgcccggcggccggcaactacagctacgcgcaggtctcggactatgcg
gtgcccccggagcagccggccgggcccctgcacccgcggttgggccccgagtccgcgggc
cctgccatgccggggctcctggcgccccccagcgccctgcacatgtactacggcgccatg
ggctcccccggggcaggcggcgcgcgcggcttccacctgccccctccgcagcagcagcac
gcgccgccgggcccgggccagggccagccttcgccgcctcccgaggcgctgccctgccgg
gaagccacggaccccgggcagcccgccgccgagctccttggggaggttgaccgcacggaa
ttcgaacagtatttgcactttgtgtgcaaacccgagatgggtctcccctaccagggacac
gactctagtgtgagtctgctggacagccacggggccatttcctccgtggtgtcggatgcc
agctctgcggtgtactactgcagctaccccgacgtctga
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