Halorhodospira halophila: Hhal_0600
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Entry
Hhal_0600 CDS
T00462
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hha
Halorhodospira halophila
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hha03032
]
Hhal_0600
03036 Chromosome and associated proteins [BR:
hha03036
]
Hhal_0600
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_0600
DNA replication proteins [BR:
hha03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Hhal_0600
Chromosome and associated proteins [BR:
hha03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Hhal_0600
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Hhal_0600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
Glycos_trans_3N
DUF2267
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ABM61386
UniProt:
A1WUM4
LinkDB
All DBs
Position
complement(678013..678285)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEAVADSADLSKAAAARAVDAMVESVTDALREGDQVTLVGFGTFTVRERAARTG
RNPRTGESIDIPASKVPGFKPGKALKDAIN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagtgagctcatcgaggcggtagccgactccgcggatctttccaaagccgct
gccgcgcgcgccgtcgacgcgatggtcgagtccgtcactgacgccctgcgcgagggcgac
caggtcacgctggtcgggttcggcaccttcaccgtccgcgagcgggccgcccgcaccggt
cggaacccgcgcaccggcgagagcatcgacatcccggcgtcaaaagtaccgggcttcaag
cctggcaaggcgctcaaggatgcgataaactaa
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