Halorhodospira halophila: Hhal_0689
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Entry
Hhal_0689 CDS
T00462
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hha
Halorhodospira halophila
Pathway
hha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hhal_0689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hha03400
]
Hhal_0689
Enzymes [BR:
hha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Hhal_0689
DNA repair and recombination proteins [BR:
hha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hhal_0689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Uma2
Motif
Other DBs
NCBI-ProteinID:
ABM61471
UniProt:
A1WUV9
LinkDB
All DBs
Position
complement(770857..771741)
Genome browser
AA seq
294 aa
AA seq
DB search
MDTRRLSYLRQLGVDCYIPRDAAVLEPAAPRQAPSADAAGAVSTPPGPAAPAGPRQEPVA
PGAGAQTGSGRAGMEAGSAGGAEPASAPTTAPEPGGAPQAAAPEAGCEDLDWDALEARVA
GCHACKLCEGRTQTVFGVGDRQADLVIIGEGPGAEEDRQGEPFVGRAGQLLDAMLAAIDR
GRDRGGVYIGNIVKCRPPGNRDPRPDEVAACTPYLRRQLELLEPKAIVALGRVAAQQLLE
TKSPLAKLRGRVHHYGAQSIPVWVTYHPAYLLRSPGEKAKVWQDLKRIRGLVEE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtggatacccggcggctcagctacctgcgccaactgggggtggactgctacatcccccgc
gacgccgccgtgctggagccggcggcgccccggcaggcgccctccgccgatgccgccggg
gccgtctcgacgccgcctgggcctgcggcgcccgccggtccccggcaggagccggtagcc
ccgggggcgggggcccagaccgggtcggggcgcgccgggatggaggccggatcggcgggc
ggtgcggagccggcgtcggcgccgacgacggccccggaaccgggcggggccccgcaagcg
gcggccccggaggcgggctgcgaggacctggactgggacgccctcgaggcccgggtggcc
ggctgtcacgcctgcaagctctgcgaggggcggacccagacggtcttcggcgtcggcgac
cggcaggcggatctggtgatcatcggcgagggcccgggggccgaggaagaccgccagggc
gaacccttcgtcgggcgggccgggcaactgctcgacgccatgctcgccgccatcgatcgt
ggccgcgaccgcggcggggtctacatcggcaacatcgtcaagtgccgcccccccggcaac
cgggacccgcggcccgacgaggtcgccgcctgcacaccgtatctgcgccggcagctcgag
ctcctcgagccgaaggcgatcgttgccctggggcgggtggcggcacagcagctgctggag
accaagtcgccgctggccaagctgcgcgggcgcgtccaccactacggggcgcagtcgatc
ccggtctgggtgacctaccacccggcctaccttttgcgctcgcccggcgagaaggccaag
gtgtggcaggatctcaagcggatccgcgggctggtcgaggaatga
DBGET
integrated database retrieval system
