Halomonas halophila: QWG60_02695
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Entry
QWG60_02695 CDS
T09170
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hhao
Halomonas halophila
Pathway
hhao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QWG60_02695 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhao03400
]
QWG60_02695 (recB)
Enzymes [BR:
hhao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QWG60_02695 (recB)
DNA repair and recombination proteins [BR:
hhao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QWG60_02695 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WJY07823
LinkDB
All DBs
Position
complement(578782..582603)
Genome browser
AA seq
1273 aa
AA seq
DB search
MTMTEDRQAAETPRLDPVALPLTGSRLIEASAGTGKTFTIALLYLRLVLGPRDEADAASF
PRPLTPPEILVVTFTNAATQELRDRIRARLVEAADAFQTDEGAAPDDAPLTGDLFSEPWG
QTPKSAEGSDPNDPLIILRDSYPRESWPTCARRLRLAAEWMDEAAVSTIHAWCHRMLREH
AFDSGSLFALEMALDQSEMDLEIARDYWRSFYYDLDPEALAIVARYWTTPDALNDTAARL
RTHAAALPVAPPPFDALANYREQRAAALAELKAPWPAWLDELEELLEAAAKRKAFNGQKL
NARSRANWLAALRDWAHDAELASPDLTPAAWKRLTPEGIAEIWKEDPVPNLPALEALAEL
PEKLAELPDPFADLLAHAVHWMAARRETVQRRRAELGPDDLLHRLDAAFAGEAGETLAAR
IREQFPVALVDEFQDTDPVQYRLFDRVYALEDNRDDSAVMLIGDPKQAIYAFRGADIHTY
LQARRDTAGRHVTLGTNFRSATPMVEAVNRVFAHAEQSESGAFLFRRGEDNPVPFAPVDA
NGRKDSLTRHGATQPALTLWHLATDDTLPKGAYLAELAARCATEMASLLREGQAGQTGFQ
KEGDFRPLAPSDLAVLVNNASEARAIRGALLARGIRSVYLSDKEGVFETEAAAELEGWLA
ACAAPDDERSLRAALATPSLGLSLAELDALNGGPQQDELAWEARVMQFRDYHRQWQRRGV
LPMLHRLLADFAVPGRLLAVPEGERRLTDLLHLGELLQEASAEIDGEHALLRFLAESRAH
PQAQSDTHRLRLESDADLVQVVTIHKSKGLEYPLVFLPFIAAFRPVKQGDLPLRWHDDDG
HLRLTLSADEAILARADHERLGEDLRKLYVALTRARHATWLGLAPLEAMERSAVGHLLKG
GEALSPDNLRPALEALADENSSDRHKQVAVQDAPEADATPVELASDDAPLGEARAPTRAI
REHWWIASYSALRTGATPDEEAESTTEAGPSPEPTTADEATAMEVIHEPFDAAAATVSEG
SLHRFPRGPSAGTFLHGLLEWAGEEGFAKVAEDAELRADTLARRANRRGWEGQIAALEQW
LPELLTTPLPVPVPGDGEAAPLRLDALNRASDYRIELEFWFAAHKVNTRKMDALVSAHTL
GGRPRPALEPDTLNGMLKGFIDLVVEHEGRFYVLDWKSNHLGADDAAYTEAAMAEAVLEK
RYDVQYCLYLLALHRLLEARLPDYDIERHLGGALYVFLRGTRAPSRGVHAERPPSELILA
LDALFRAAEEAVA
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacggaagacaggcaagcggccgagacgcctcggctcgatcccgtggccctg
ccgctcaccggcagccggctgatcgaggccagcgccggcaccggcaagaccttcaccatc
gccctgctctacctgcgcctggtactcggcccccgcgatgaagcggacgcggccagcttc
ccgcggccactgacgccgccggagatcctggtggtcaccttcaccaacgccgccacccag
gagctgcgcgaccgcatccgcgcccggctggtggaagccgccgacgccttccagaccgat
gaaggggcagctcccgacgacgccccgctgaccggcgacctcttcagcgaaccttggggt
cagaccccaaagtccgctgaggggtctgaccccaatgatcccttaatcatcctgcgcgac
agctatccgcgcgagagctggccgacctgcgcccgccggctgcggctggccgccgagtgg
atggacgaggccgcggtttccaccatccacgcctggtgccaccgcatgctgcgcgagcac
gccttcgacagcggcagcctgttcgccctggaaatggcgctggaccagtcggagatggac
ctggagatcgcccgggactactggcgcagcttctactacgacctcgaccccgaggcgctg
gccatcgtcgcccgctactggaccacgccggacgccctgaacgacaccgccgcccggctg
cgcacccacgccgccgccctgcccgtggccccgccgccgtttgatgcgctcgcgaactac
cgcgagcagcgcgccgcggcgctggccgagctcaaggcgccctggccggcctggctcgac
gagctggaagaactgctcgaggccgccgccaagcgcaaggcgttcaacggccagaagctc
aacgccaggagccgcgccaactggctcgccgccctgcgtgactgggcccatgacgccgag
ctggcgagccccgacctcacccccgccgcctggaagcgcctgacgcccgagggcatcgcc
gagatctggaaggaagatcccgtgccgaatctgccggcgctggaggccctggccgagctg
ccggagaagctcgccgagctgcccgacccgttcgccgacctgctcgcccacgccgtgcac
tggatggccgcgcgccgcgagaccgtgcagcgccgccgcgccgagctcggccccgacgac
ctgctgcaccggctggacgccgccttcgcgggcgaggccggcgagacgctggctgcgcgc
atccgcgagcagttcccggtggcgctggtcgacgagttccaggacaccgacccggtgcag
taccggctgttcgaccgggtctatgcgctggaagacaatcgtgatgacagcgcagtaatg
ctgatcggcgatcccaagcaggcgatctacgccttccgcggcgccgatatccatacctac
ctccaggcccggcgcgacaccgccggccgccacgtcacgctgggcaccaacttccgctcc
gccacgcccatggtcgaggccgtgaaccgggtgttcgcccacgccgagcagagcgaatcc
ggggccttcctgttccgccgcggcgaagacaacccagtgcccttcgctccggtagacgcc
aacggcaggaaggactcactcacccggcacggcgccacccagccggcgctgacgctctgg
cacctggccaccgacgacaccctgcccaagggcgcctacctggccgagctggccgcgcgc
tgcgccaccgagatggcgagcctgctgcgcgagggccaggccgggcagaccggtttccag
aaagagggagacttccggccgctggcgccgtcggacctcgccgtgctggtcaacaacgcc
agcgaggcccgcgccattcgcggcgccctgctggcccgcggcatccgcagcgtctacctc
tccgacaaggagggcgtgttcgagaccgaggccgccgccgagctggaggggtggctcgcc
gcctgcgccgcgccggacgacgagcgcagcctgcgcgccgcactcgccacgccgagcctg
gggctctcgcttgccgagctcgacgccctgaacggcggcccccagcaggacgagctggcc
tgggaggcgcgggtgatgcagttccgcgactaccaccgccagtggcagcgccgcggcgtg
ctgcccatgctgcaccggctgctggccgacttcgccgtgcccggccggctgctggcggtg
cccgagggcgagcggcggctcaccgacctgctgcacctcggcgagctgctgcaggaggcc
agcgccgagatcgacggcgagcacgccctgctgcgctttctcgccgagtcccgcgcccat
ccccaggcgcagtccgacacccaccgcctgcgcctggagagcgacgccgacctggtgcag
gtggtcaccatccacaagtccaagggcctggagtacccgctggtgttcctgcccttcatc
gccgccttccgcccggtgaagcagggcgacctgccgctgcgctggcacgacgacgacggc
catctgcgcctgacgctctccgccgacgaggccatcctggcccgcgccgaccatgagcgc
ctgggcgaggatctgcgcaagctctacgtcgccctgacccgcgcccgccacgccacctgg
ctcggcctggcgccgctggaggccatggagcgcagcgccgtcggccacctgctcaagggg
ggcgaggcgctctcgcccgacaacctgcgcccggcgctcgaggcgctggccgacgagaac
agcagcgatcgccacaaacaggtcgcggtgcaggacgcccccgaggccgatgccacgccg
gtcgagctcgccagcgacgacgcgccgctgggcgaggcccgcgcgcccacccgggcaatc
cgcgagcactggtggatcgccagctactcggcgctgcgcaccggtgccacgccggacgaa
gaagctgaatcgacgaccgaggccgggccgtcgcccgagcccaccaccgccgacgaggcc
acggccatggaggtgatccacgagcccttcgatgccgccgcggccacggtgagcgaaggc
tcgcttcaccgcttcccccgcgggccctcggcgggcaccttcctgcacggcctgctggaa
tgggccggcgaggaaggcttcgccaaggtggccgaggacgccgagctgcgcgccgacacc
ctggcccggcgcgccaaccgccgcggctgggagggccagatcgccgccctcgaacagtgg
ctgccggagctgctgaccacgccgctgccggtgccggtgccgggcgacggcgaagccgca
ccgctgcgcctcgatgccctgaatcgcgcgtccgactaccggatcgagctggaattctgg
ttcgccgcccacaaggtcaacacccgcaagatggacgccctcgtaagcgctcacacactc
ggcgggcggccgaggccggcgctcgagcccgacaccctcaacggcatgctcaagggcttc
atcgatctggtggtggagcacgaaggccgcttctacgtgctcgactggaagtccaaccac
ctgggcgcagacgacgccgcctacaccgaggcggcgatggcggaggccgtgctcgagaag
cgctacgacgtgcagtactgcctctacctgctggccctgcaccgactgctcgaggcccgg
ctgccggactacgacatcgagcgccacctgggcggggcgctctacgtcttcctgcgcggc
acccgcgcgccctcccgcggcgtgcacgccgaacgcccgccgagcgagctgatcctcgcg
ctcgatgccctgttccgcgccgccgaggaggccgtcgcatga
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