Halomonas halophila: QWG60_10005
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Entry
QWG60_10005 CDS
T09170
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hhao
Halomonas halophila
Brite
KEGG Orthology (KO) [BR:
hhao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhao03000
]
QWG60_10005
Transcription factors [BR:
hhao03000
]
Prokaryotic type
Helix-turn-helix
Other families
QWG60_10005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_23
HTH_Tnp_ISL3
AAA_16
HTH_29
HTH_30
HTH_50
HTH_17
AAA
HTH_7
HTH_AsnC-type
HTH_22
AAA_5
TrmB
HTH_28
Mg_chelatase
HTH_IclR
HTH_20
AAA_22
HTH_11
HTH_24
HTH_21
DprA_WH
Xre-like-HTH
Sigma70_r4_2
HTH_AraC
IclR
AAA_2
HTH_1
HTH_38
HTH_5
TetR_N
Sigma70_r4
AAA_7
DUF2089
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
WJY08927
LinkDB
All DBs
Position
2155882..2157843
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AA seq
653 aa
AA seq
DB search
MRLGEGRDACPAEHRDVIRRSWQRCLGEYRLDPCHPRPVRVLTQQALRDHQESVDELLHV
ARAGVDRLYGQVARLGYALLLTDQRGITVAFRGQSEQDRALRRAGLYLGADWNERHAGTC
AVGTCLHDGQAITCHQGEHFDATHIDLTCTAAPITDPQGRVMAVLDISALQSPRSHESQT
FALSLVNLHARMIEDAYFLHRYRDSLILRFDSAREFVHLNGRGLIAIEEDGSLIAANHEG
RALIDAHLRRWPPWSAACLPGATQLFDAELGDLLGIPAAGEDQIRAFRARANDATCFVTL
LEPRGRPRKATTTAAPRDASVPALDRLAGDDPAMHRLLKLARRLRNETVSVLIHGETGTG
KEVLARALHDSGPRAQAPFVAVNCAAIPEALIESELFGYLPGAFTGGRPKGMRGLIQQAD
GGTLFLDEIGDMPLTLQTRLLRVLAEREVMPLGAETPVKVDIRVVTATHRDVTELIRAGD
FREDLYYRLNGAELHLPALRERADRHYVIRRVHDELQAERGQSHHLRADAMSALLAHDWP
GNIRQLRNALAFAMATAEGDEITLHDLPETCHGAAGPTTLTAPASLGSAPGSASPSTSAG
APPSADGQALLELLRRSAWNISQVARQLGVSRPTVYRRMRRHGLVAPNHQPVS
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgggcgaaggccgcgacgcctgccctgccgaacaccgcgacgtcatccgccgc
tcctggcagcgctgcctgggcgagtatcggctcgatccctgccacccgcggccggtgcgc
gtgctcacccagcaggcgctgcgcgatcaccaggaatcggtcgacgaactgctgcacgtg
gcccgcgccggggtcgatcgcctctacggccaggtcgcccggctcggctacgcgctgttg
ctcaccgaccagcgcggcatcaccgtggcctttcgcggccagtccgagcaggaccgggcc
ctgcgccgcgccgggctctacctgggcgccgactggaacgaacgccacgccggcacctgc
gcggtgggcacctgcctgcatgacggccaggccatcacctgccaccagggcgagcacttc
gacgccacccacatcgacctgacctgcacggcggcgccgatcaccgatccccaggggcgg
gtgatggcggtgctggacatctccgcgctgcagtcgccgcgctcccacgagagccagacc
ttcgccctgtcgctggtcaacctgcacgcgcggatgatcgaggacgcctacttcctgcac
cgctaccgggacagcctgatcctgcgcttcgacagtgcccgggaattcgtgcatctcaac
ggccgcgggctgatcgccatcgaggaggacggcagcctgatcgccgccaatcacgaaggc
cgcgccctgatcgacgcccacctgcgccgctggccgccctggtcggcggcctgcctgccc
ggcgccacccagctgttcgacgccgagctcggcgacctcttgggcattccggccgcgggc
gaggaccagatccgcgcgtttcgcgcccgggccaacgacgcgacctgcttcgttaccctg
ctcgagccgcgcggccgcccgcggaaggccaccaccacggcggccccgcgcgatgcctcg
gtgccggcgctggatcgactcgccggcgatgacccggcgatgcaccgcctgctcaagctg
gcccggcggctgcggaacgagaccgtgagcgtgctgattcacggcgagacgggcaccggc
aaggaggtgctggcccgcgccctgcacgacagcggcccacgggcccaggcccccttcgtg
gcggtgaactgcgcggccattcccgaagcgctgatcgagagcgagctgttcggctatctg
cccggcgccttcaccggcgggcggcccaagggcatgcgcgggctgatccagcaggccgac
ggcggcaccctgttcctcgacgagatcggcgacatgccgctgacgctgcagacccgcctg
ctgcgagtgctggccgagcgcgaggtgatgccgctgggcgccgagacgccggtgaaggtc
gacatccgcgtggtcaccgccacccaccgcgacgtgaccgagctgatccgagccggcgac
ttccgcgaggacctctactaccgcctcaacggcgccgagctgcacctgcccgcgctgcgc
gaacgcgccgaccggcactacgtgatccgccgcgtccacgacgagctccaggccgaacgc
ggccagtcgcatcacctgcgcgccgacgccatgagcgcgctgctggcccacgactggccg
ggcaatatccgccagctcagaaacgcgctggccttcgccatggccaccgcggaaggcgac
gagatcacccttcacgacctgcccgagacctgccacggcgccgccgggcccaccaccctc
acggcaccggcgtcgcttggctcggcacccggttcggcctctccttcaacgtcggccggc
gccccaccctcggcagacggccaggcgctgctcgagctgctcaggcgctcggcctggaac
atcagccaggtcgcccgccagctcggcgtctcacgccccaccgtctaccgccgcatgcgt
cgccacggcctggtggcgccgaatcaccagcccgtctcgtaa
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