Ectothiorhodospira haloalkaliphila: M911_01500
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Entry
M911_01500 CDS
T03059
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hhc
Ectothiorhodospira haloalkaliphila
Pathway
hhc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M911_01500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhc03019
]
M911_01500
Enzymes [BR:
hhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M911_01500
Messenger RNA biogenesis [BR:
hhc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M911_01500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AHK78094
UniProt:
W8KEA6
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All DBs
Position
complement(319889..321316)
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AA seq
475 aa
AA seq
DB search
MTDQHVSDTHFASFDLPDPVRQGLTDAGFTHCTPIQGLALPPALEGKDVAGQAQTGTGKT
AAFLITVFTHLLRHPAPEQRRPNQVRALILAPTRELAIQIHKDAMVLGSHTGLTLGLAYG
GTDYEKQRKQLSDGVDILIGTPGRIIDYFKQKVFDLRQAQTLVLDEADRMFDLGFIKDVR
FLLRRMPPPTERQSMLFSATLSWRVMELAYEHMNNPAKVQTQDEQVTAERVRQAIYYPAN
DQKIPLLLGLMRKLGPERSMVFVNTKHGAEKVTAWLEGNGIRVALLSGDVPQRKRQSLLA
KFEQSEYQVLVATDVAARGLHIPDVSHVFNFDLPQSGEDYVHRIGRTGRAGAEGDAISFA
CEDFAFHLPEIEEYIGFKIDSEMTDHAILATDLEPPKRRQRKPSSGPPRGRSGGRSGSSS
GPGKQPRARQRSDQESTAGSQAAKPQGEPSGEGNGKPPRRRRRRKPRQEGPATPS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcaacatgtttctgatacgcacttcgcaagtttcgacctcccggacccggtt
cgccagggtctgacggacgccggcttcacccactgcacccccattcaaggcctggccctg
cccccggcactggagggcaaggacgtggccggacaggcccagacgggcaccggcaagacg
gcggccttcctgatcaccgtgttcacccacctgcttcgacacccggccccggagcagcgc
cggcccaaccaggtgcgggcactgatcctggcgcccacccgcgaattggccatccagatc
cacaaggatgccatggtgctcggcagccataccggcctcaccctcggactggcctacggc
ggcaccgattacgagaagcagcgcaagcaactctcggatggggtggacatcctgatcggc
accccggggcgcatcattgattatttcaagcagaaggtcttcgacctgcgtcaggcccag
acactggtgctggacgaggccgatcgcatgttcgacctgggcttcatcaaggacgtgcgt
ttcctgctcaggcgcatgcccccgcccaccgaacggcagtccatgctgttttccgccacc
ctgtcctggcgcgtgatggaactggcctacgaacacatgaacaacccggccaaggtgcaa
acccaggacgaacaggtgaccgccgagcgggtccgtcaggccatctactacccggccaac
gaccagaagattccgctgctgctgggcctgatgcgcaagctcgggccggagcgatccatg
gtgttcgtgaacaccaagcatggcgccgagaaggtcaccgcatggctcgagggcaacggc
atccgtgtggccctgctctccggagatgtgccacagcgcaagcgtcagagcctgctggcg
aagtttgagcaaagcgagtatcaggtcctggtagccaccgatgtggcggcccgtggcctg
cacatcccggatgtctcccatgtgttcaattttgatttgccccagtccggggaggactat
gtgcaccgcatcggtcgcacgggacgcgccggcgccgagggcgacgccatcagctttgcc
tgcgaggacttcgcctttcatctgccggagatcgaggaatacatcggcttcaagatcgac
tcggagatgaccgaccacgccatcctggccacggacctggaaccccctaaaaggcgccag
cgaaagccttcatccggtccgccacgggggcgttccggtggccgctccggttcctccagc
ggcccgggcaaacagccccgcgcccggcagcgttcagaccaggagtccacggccggatca
caggcagccaaaccccagggtgaaccgtccggggaaggcaatggcaagccgccccgccgt
cgccgtcggcgcaaaccccgccaggaggggccggcaacaccttcctga
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